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> Protein (NX_A0AV96)
Protein (NX_A0AV96)
Protein
Gene SymbolRBM47 to neXtProt (NX_A0AV96)
DescriptionRNA-binding protein 47
Chromosome4
Location4p14 (40425272 ~ 40632892) to Ensembl
Sequene Features : Isoforms 2, Variants 112, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.hematopoietic progenitor cell differentiation .poly(A) RNA binding
.nucleotide binding
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 112 5
2014-09-19protein level
2 74 5
2014-05-27protein level
2 74 5
2014-02-25protein level
2 73 0
2013-12-09protein level
2 60 0
2013-11-01protein level
2 56 0
2013-09-12protein level
2 56 0
2013-08-17protein level
2 56 0
2013-07-15protein level
2 34 0
2013-06-11protein level
2 34 0
2013-02-12protein level
2 14 0
2012-12-20protein level
2 14 0
2012-10-30protein level
2 16 0
2012-10-07protein level
2 16 0
2012-08-24protein level
2 7 0
2012-07-28protein level
2 7 0
2012-06-08protein level
2 10 0
2012-05-07protein level
2 10 0
2012-04-10protein level
2 10 0
2012-01-13protein level
2 7 0
2011-12-20protein level
2 7 0
2011-11-11protein level
2 7 0
2011-08-23protein level
2 7 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_A0AV96-1
2 21 2 64058.0535
NX_A0AV96-2
1 21 2 56883.317
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland91
ascites25
bladder100
blood89
brain9
cervix20
connective tissue33
embryonic tissue70
eye33
intestine125
kidney204
larynx42
liver43
lung71
mammary gland171
mouth166
muscle37
nerve193
ovary78
pancreas56
parathyroid874
pharynx73
placenta88
prostate158
skin23
spleen18
stomach73
testis36
thymus25
thyroid85
trachea617
uterus30
vascular19
Health State
TissuesTPM*
normal58
adrenal tumor158
bladder carcinoma56
breast (mammary gland) tumor75
chondrosarcoma36
colorectal tumor62
gastrointestinal tumor33
germ cell tumor22
glioma65
head and neck tumor104
kidney tumor58
liver tumor52
lung tumor9
non-neoplasia41
ovarian tumor105
pancreatic tumor28
prostate cancer154
retinoblastoma21
soft tissue/muscle tissue tumor15
uterine tumor55
Developmental Stage
TissuesTPM*
adult96
embryoid body100
blastocyst48
fetus21
juvenile35
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue8.6
adrenal gland34.7
appendix20.6
bone marrow7.7
cerebral cortex1.3
colon61.4
duodenum59.2
esophagus24
gallbladder20.1
kidney64.3
liver21.9
lung20.5
lymph node7.7
ovary2
pancreas12.4
placenta24.4
prostate36.5
salivary gland45.5
skin4.9
small intestine56.1
spleen15.3
stomach60.4
testis8.9
thyroid gland49
urinary bladder19.1
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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