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> Protein (NX_A0PJX4)
Protein (NX_A0PJX4)
Protein
Gene SymbolSHISA3 to neXtProt (NX_A0PJX4)
DescriptionProtein shisa-3 homolog
Chromosome4
Location4p13 (42399856 ~ 42404504) to Ensembl
Sequene Features : Isoforms 1, Variants 36, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.multicellular organismal development .N/A .integral component of membrane
.endoplasmic reticulum membrane
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 36 0
2014-09-19protein level
1 24 0
2014-05-27protein level
1 24 0
2014-02-25protein level
1 23 0
2013-12-09protein level
1 19 0
2013-11-01protein level
1 19 0
2013-09-12protein level
1 19 0
2013-08-17protein level
1 19 0
2013-07-15transcript level
1 15 0
2013-06-11transcript level
1 15 0
2013-02-12transcript level
1 8 0
2012-12-20transcript level
1 8 0
2012-10-30transcript level
1 7 0
2012-10-07transcript level
1 7 0
2012-08-24transcript level
1 6 0
2012-07-28transcript level
1 6 0
2012-06-08transcript level
1 7 0
2012-05-07transcript level
1 4 0
2012-04-10transcript level
1 4 0
2012-01-13transcript level
1 2 0
2011-12-20transcript level
1 2 0
2011-11-11transcript level
1 2 0
2011-08-23transcript level
1 2 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_A0PJX4-1
10 0 0 25815.4935
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-10171518,EBI-302345 PNMA1  
  .positive regulation of apoptotic process
.inflammatory response to antigenic stimulus
.N/A .focal adhesion
.cytoplasm
.nucleolus
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland30
brain1
connective tissue13
intestine4
kidney18
lung2
prostate21
uterus12
vascular19
Health State
TissuesTPM*
normal4
adrenal tumor79
kidney tumor14
non-neoplasia10
primitive neuroectodermal tumor of the CNS31
prostate cancer38
uterine tumor22
Developmental Stage
TissuesTPM*
adult2
fetus1
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue3.5
adrenal gland1.8
appendix2.3
colon5.1
duodenum2.5
esophagus2.1
gallbladder1.6
heart muscle2
kidney22.5
lung5.2
lymph node8.5
small intestine6.5
stomach2.5
thyroid gland2.8
urinary bladder1.1
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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