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> Protein (NX_A1L190)
Protein (NX_A1L190)
Protein
Gene SymbolSYCE3 to neXtProt (NX_A1L190)
DescriptionSynaptonemal complex central element protein 3
Chromosome22
Location22q13.33 (50989541 ~ 51001334) to Ensembl
Sequene Features : Isoforms 1, Variants 12, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.cell division
.positive regulation of apoptotic process
.spermatogenesis
  + 2 more...
.N/A .chromosome
.nucleus
.central element
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01homology
1 12 0
2014-09-19homology
1 9 0
2014-05-27homology
1 9 0
2014-02-25homology
1 9 0
2013-12-09homology
1 8 0
2013-11-01homology
1 8 0
2013-09-12homology
1 8 0
2013-08-17homology
1 8 0
2013-07-15homology
1 5 0
2013-06-11homology
1 5 0
2013-02-12homology
1 3 0
2012-12-20homology
1 4 0
2012-10-30homology
1 4 0
2012-10-07homology
1 4 0
2012-08-24homology
1 4 0
2012-07-28homology
1 4 0
2012-06-08homology
1 4 0
2012-05-07homology
1 4 0
2012-04-10homology
1 4 0
2012-01-13homology
1 2 0
2011-12-20homology
1 2 0
2011-11-11predicted
1 2 0
2011-08-23predicted
1 2 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_A1L190-1
5 0 0 10594.0007
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-10283466,EBI-2514791 HAUS1  
  .cell division
.centrosome organization
.spindle assembly
.mitotic nuclear division
.N/A .HAUS complex
.microtubule
.centrosome
  + 2 more...
2 EBI-10283466,EBI-465781 BLOC1S6  
  .membrane fusion
.membrane organization
.positive regulation of pigment cell differentiation
  + 12 more...
.actin filament binding
.protein homodimerization activity
.identical protein binding
.syntaxin binding
.BLOC-1 complex
.transport vesicle
.extrinsic component of membrane
  + 4 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
kidney4
lung2
testis41
Health State
TissuesTPM*
normal1
germ cell tumor3
Developmental Stage
TissuesTPM*
fetus1
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
gallbladder1.6
testis62.5
thyroid gland1.6
urinary bladder2
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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