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> Protein (NX_A4D1U4)
Protein (NX_A4D1U4)
Protein
Gene SymbolLCHN to neXtProt (NX_A4D1U4)
DescriptionProtein LCHN
Chromosome7
Location7q34 (141356528 ~ 141401953) to Ensembl
Sequene Features : Isoforms 1, Variants 12, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .N/A
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 12 2
2014-09-19protein level
1 32 2
2014-05-27protein level
1 32 2
2014-02-25protein level
1 32 1
2013-12-09protein level
1 24 1
2013-11-01protein level
1 24 1
2013-09-12protein level
1 24 1
2013-08-17protein level
1 24 1
2013-07-15protein level
1 14 0
2013-06-11protein level
1 14 0
2013-02-12transcript level
1 8 0
2012-12-20transcript level
1 7 0
2012-10-30transcript level
1 9 0
2012-10-07transcript level
1 9 0
2012-08-24transcript level
1 4 0
2012-07-28transcript level
1 4 0
2012-06-08transcript level
1 4 0
2012-05-07transcript level
1 4 0
2012-04-10transcript level
1 4 0
2012-01-13transcript level
1 3 0
2011-12-20transcript level
1 3 0
2011-11-11transcript level
1 3 0
2011-08-23transcript level
1 3 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_A4D1U4-1
25 0 0 51412.4895
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland91
blood24
bone marrow20
brain26
cervix20
connective tissue26
embryonic tissue14
eye62
heart78
intestine51
kidney37
larynx127
liver48
lung101
lymph node89
mammary gland19
mouth15
muscle47
nerve64
ovary39
pancreas23
parathyroid145
pituitary gland60
placenta3
prostate42
skin14
spleen18
stomach20
testis2
thymus25
thyroid42
trachea19
uterus25
vascular38
Health State
TissuesTPM*
normal38
adrenal tumor79
breast (mammary gland) tumor32
chondrosarcoma36
colorectal tumor35
gastrointestinal tumor16
germ cell tumor7
glioma18
head and neck tumor37
kidney tumor43
leukemia21
liver tumor10
lung tumor9
lymphoma13
non-neoplasia10
ovarian tumor52
pancreatic tumor47
prostate cancer19
retinoblastoma43
soft tissue/muscle tissue tumor7
uterine tumor55
Developmental Stage
TissuesTPM*
adult37
embryoid body14
fetus53
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue7.4
adrenal gland6.9
appendix15.3
bone marrow4.1
cerebral cortex24
colon14.8
duodenum10.6
esophagus9.8
gallbladder8.7
heart muscle5.1
kidney18.7
liver6.4
lung16.4
lymph node18.5
ovary7.2
pancreas7.3
placenta3.8
prostate10.5
salivary gland7.6
skin8.6
small intestine14
spleen20.2
stomach22.7
testis2.3
thyroid gland19.6
urinary bladder10.2
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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