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> Protein (NX_A6NDB9)
Protein (NX_A6NDB9)
Protein
Gene SymbolPALM3 to neXtProt (NX_A6NDB9)
DescriptionParalemmin-3
Chromosome19
Location19p13.12 (14164177 ~ 14169971) to Ensembl
Sequene Features : Isoforms 1, Variants 42, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.response to lipopolysaccharide
.Toll signaling pathway
.negative regulation of cytokine-mediated signaling pathway
.ATP binding .plasma membrane
.cytoplasm
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 42 8
2014-09-19protein level
1 38 8
2014-05-27protein level
1 38 8
2014-02-25protein level
1 36 8
2013-12-09protein level
1 26 8
2013-11-01protein level
1 26 8
2013-09-12protein level
1 26 8
2013-08-17protein level
1 26 8
2013-07-15protein level
1 21 8
2013-06-11protein level
1 21 8
2013-02-12protein level
1 18 8
2012-12-20protein level
1 21 8
2012-10-30protein level
1 24 8
2012-10-07protein level
1 24 8
2012-08-24protein level
1 22 8
2012-07-28protein level
1 21 8
2012-06-08protein level
1 21 8
2012-05-07protein level
1 21 8
2012-04-10protein level
1 21 8
2012-01-13protein level
1 14 8
2011-12-20protein level
1 14 8
2011-11-11protein level
1 14 8
2011-08-23protein level
1 14 8
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_A6NDB9-1
30 0 0 71652.0376
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
bladder33
brain2
eye23
heart22
kidney14
lung8
placenta3
prostate15
stomach10
Health State
TissuesTPM*
normal4
bladder carcinoma56
gastrointestinal tumor8
germ cell tumor3
lung tumor9
retinoblastoma64
Developmental Stage
TissuesTPM*
adult5
fetus5
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
duodenum2.7
gallbladder3.7
kidney21.4
liver13.3
lung4
pancreas5.5
placenta2.3
prostate1.8
salivary gland7
small intestine1.2
stomach13.7
testis10
thyroid gland6.1
urinary bladder3.4
Tissues
TissuesExpression level
epididymisMedium
kidneyMedium
liverLow
pancreasLow
parathyroid glandMedium
seminal vesicleMedium
stomach 1Medium
stomach 2Medium
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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