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> Protein (NX_A6NDG6)
Protein (NX_A6NDG6)
Protein
Gene SymbolPGP to neXtProt (NX_A6NDG6)
DescriptionPhosphoglycolate phosphatase
Chromosome16
Location16p13.3 (2261998 ~ 2264808) to Ensembl
Sequene Features : Isoforms 1, Variants 12, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.peptidyl-tyrosine dephosphorylation
.dephosphorylation
.carbohydrate metabolic process
.nucleotide phosphatase activity, acting on free nucleotides
.phosphoglycolate phosphatase activity
.protein tyrosine phosphatase activity
.magnesium ion binding
.N/A
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 12 0
2014-09-19protein level
1 8 0
2014-05-27protein level
1 8 0
2014-02-25protein level
1 8 0
2013-12-09protein level
1 5 0
2013-11-01protein level
1 5 0
2013-09-12protein level
1 5 0
2013-08-17protein level
1 5 0
2013-07-15protein level
1 5 0
2013-06-11protein level
1 5 0
2013-02-12protein level
1 4 0
2012-12-20protein level
1 3 0
2012-10-30protein level
1 4 0
2012-10-07protein level
1 4 0
2012-08-24protein level
1 4 0
2012-07-28protein level
1 4 0
2012-06-08protein level
1 4 0
2012-05-07protein level
1 4 0
2012-04-10protein level
1 4 0
2012-01-13protein level
1 4 0
2011-12-20protein level
1 4 0
2011-11-11protein level
1 4 0
2011-08-23protein level
1 4 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_A6NDG6-1
17 0 0 33984.4099
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland30
ascites25
bladder66
bone marrow20
brain53
cervix103
connective tissue6
embryonic tissue51
esophagus49
eye47
intestine38
kidney18
liver19
lung26
lymph45
lymph node11
mammary gland6
muscle56
ovary9
pancreas46
placenta3
prostate31
salivary gland148
skin66
stomach10
testis73
thymus25
thyroid21
uterus30
Health State
TissuesTPM*
normal37
adrenal tumor79
bladder carcinoma170
breast (mammary gland) tumor10
cervical tumor57
colorectal tumor35
esophageal tumor57
gastrointestinal tumor16
germ cell tumor11
glioma102
head and neck tumor7
kidney tumor14
leukemia21
liver tumor20
lung tumor9
lymphoma55
non-neoplasia10
pancreatic tumor66
primitive neuroectodermal tumor of the CNS39
prostate cancer38
retinoblastoma21
skin tumor103
soft tissue/muscle tissue tumor23
uterine tumor44
Developmental Stage
TissuesTPM*
adult24
embryoid body71
blastocyst65
fetus37
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue4.4
adrenal gland6.3
appendix6.2
bone marrow5.8
cerebral cortex11
colon6.2
duodenum6.9
esophagus3.2
gallbladder4.9
heart muscle8.4
kidney7
liver2.6
lung6.3
lymph node7
ovary1.7
pancreas2.6
placenta6
prostate6.7
salivary gland3.8
skin4.1
small intestine5.6
spleen7.9
stomach5.7
testis18.6
thyroid gland9.6
urinary bladder4.3
Tissues
TissuesExpression level
adrenal glandMedium
appendixMedium
bone marrowLow
breastMedium
bronchusMedium
cerebellumMedium
cerebral cortexMedium
cervix, uterineMedium
colonMedium
duodenumHigh
endometrium 1Medium
endometrium 2Medium
epididymisLow
esophagusMedium
fallopian tubeHigh
gallbladderMedium
heart muscleLow
hippocampusMedium
kidneyMedium
lateral ventricleHigh
liverHigh
lungMedium
lymph nodeMedium
nasopharynxMedium
oral mucosaMedium
ovaryLow
pancreasHigh
parathyroid glandMedium
placentaMedium
prostateMedium
rectumMedium
salivary glandMedium
seminal vesicleMedium
skeletal muscleLow
skin 1Medium
skin 2Medium
small intestineMedium
smooth muscleLow
soft tissue 1Low
soft tissue 2Low
spleenHigh
stomach 1Medium
stomach 2Medium
testisMedium
thyroid glandMedium
tonsilHigh
urinary bladderMedium
vaginaLow
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*172280, gene) Phosphoglycolate phosphatase; PGPOMIM


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