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> Protein (NX_A6NED2)
Protein (NX_A6NED2)
Protein
Gene SymbolRCCD1 to neXtProt (NX_A6NED2)
DescriptionRCC1 domain-containing protein 1
Chromosome15
Location15q26.1 (91498100 ~ 91506349) to Ensembl
Sequene Features : Isoforms 1, Variants 20, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .plasma membrane
.cytoplasm
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 20 4
2014-09-19protein level
1 18 4
2014-05-27protein level
1 18 4
2014-02-25protein level
1 18 4
2013-12-09protein level
1 15 4
2013-11-01protein level
1 15 2
2013-09-12protein level
1 15 2
2013-08-17protein level
1 15 2
2013-07-15protein level
1 13 0
2013-06-11protein level
1 13 0
2013-02-12protein level
1 10 0
2012-12-20protein level
1 7 0
2012-10-30protein level
1 10 0
2012-10-07protein level
1 10 0
2012-08-24protein level
1 10 0
2012-07-28protein level
1 9 0
2012-06-08protein level
1 10 0
2012-05-07protein level
1 8 0
2012-04-10protein level
1 8 0
2012-01-13protein level
1 5 0
2011-12-20protein level
1 5 0
2011-11-11protein level
1 5 0
2011-08-23protein level
1 5 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_A6NED2-1
18 0 0 40053.8678
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue77
ascites25
blood49
bone13
brain13
cervix103
embryonic tissue14
eye23
heart22
intestine68
kidney23
larynx42
liver14
lung17
lymph45
lymph node33
mammary gland33
mouth15
muscle9
ovary49
pancreas23
parathyroid97
placenta7
prostate10
skin23
stomach20
testis29
tonsil58
uterus8
Health State
TissuesTPM*
normal17
breast (mammary gland) tumor53
cervical tumor86
chondrosarcoma12
colorectal tumor71
gastrointestinal tumor25
germ cell tumor18
glioma27
head and neck tumor14
kidney tumor43
leukemia10
lung tumor38
lymphoma27
non-neoplasia10
ovarian tumor39
pancreatic tumor47
primitive neuroectodermal tumor of the CNS102
retinoblastoma64
skin tumor15
soft tissue/muscle tissue tumor23
Developmental Stage
TissuesTPM*
adult14
blastocyst16
fetus32
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue5.3
adrenal gland8.2
appendix7.8
bone marrow6.8
cerebral cortex5.7
colon8.9
duodenum8.6
esophagus6
gallbladder4.9
heart muscle5.5
kidney8.6
liver4
lung4.2
lymph node8.6
ovary8.5
pancreas4.3
placenta4.4
prostate6.1
salivary gland7.7
skin11.8
small intestine7.7
spleen5.2
stomach7.2
testis7.9
thyroid gland5.8
urinary bladder5.8
Tissues
TissuesExpression level
adrenal glandMedium
appendixMedium
bone marrowMedium
breastMedium
bronchusMedium
cerebellumMedium
cerebral cortexMedium
cervix, uterineMedium
colonMedium
duodenumMedium
endometrium 1Low
endometrium 2Medium
epididymisMedium
esophagusMedium
fallopian tubeMedium
gallbladderMedium
heart muscleHigh
hippocampusMedium
kidneyMedium
lateral ventricleMedium
liverMedium
lungHigh
lymph nodeMedium
nasopharynxMedium
oral mucosaLow
ovaryLow
pancreasMedium
parathyroid glandMedium
placentaMedium
prostateMedium
rectumMedium
salivary glandLow
seminal vesicleMedium
skeletal muscleMedium
skin 1Medium
skin 2Medium
small intestineMedium
smooth muscleLow
soft tissue 1Medium
soft tissue 2Medium
spleenMedium
stomach 1Medium
stomach 2High
testisMedium
thyroid glandMedium
tonsilMedium
urinary bladderMedium
vaginaMedium
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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