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> Protein (NX_A6NFR6)
Protein (NX_A6NFR6)
Protein
Gene SymbolC5orf60 to neXtProt (NX_A6NFR6)
DescriptionPutative uncharacterized protein C5orf60
Chromosome5
Location5q35.3 (179068545 ~ 179072047) to Ensembl
Sequene Features : Isoforms 4, Variants 39, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .integral component of membrane
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
4 39 0
2014-09-19transcript level
4 30 0
2014-05-27transcript level
4 30 0
2014-02-25transcript level
4 30 0
2013-12-09transcript level
4 25 0
2013-11-01transcript level
4 24 0
2013-09-12transcript level
4 24 0
2013-08-17transcript level
4 24 0
2013-07-15transcript level
4 16 0
2013-06-11transcript level
4 16 0
2013-02-12transcript level
4 13 0
2012-12-20transcript level
4 10 0
2012-10-30transcript level
4 15 0
2012-10-07transcript level
4 15 0
2012-08-24transcript level
4 14 0
2012-07-28transcript level
4 13 0
2012-06-08transcript level
4 3 0
2012-05-07transcript level
4 3 0
2012-04-10transcript level
4 3 0
2012-01-13transcript level
4 3 0
2011-12-20transcript level
4 11 0
2011-11-11transcript level
4 11 0
2011-08-23transcript level
4 11 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_A6NFR6-1
6 9 0 39225.1087
NX_A6NFR6-2
1 11 0 31034.1634
NX_A6NFR6-3
1 9 0 26024.686
NX_A6NFR6-4
1 11 0 30580.8949
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-10173955,EBI-10172052 KRTAP10-9  
  .N/A .N/A .keratin filament
2 EBI-10173955,EBI-948001 KRT31  
  .epidermis development .structural constituent of cytoskeleton .extracellular exosome
.intermediate filament
.extracellular space
3 EBI-10173955,EBI-10171697 KRT40  
  .N/A .structural molecule activity .intermediate filament
4 EBI-10173955,EBI-945833 NOTCH2NL  
  .cell differentiation
.multicellular organismal development
.Notch signaling pathway
.calcium ion binding .cytoplasm
.extracellular region
5 EBI-10173955,EBI-751260 KRTAP3-2  
  .N/A .structural molecule activity .keratin filament
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
brain1
testis32
Health State
TissuesTPM*
normal2
Developmental Stage
TissuesTPM*
adult1
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
testis16.4
Tissues
TissuesExpression level
adrenal glandMedium
appendixLow
breastLow
cerebellumLow
cerebral cortexLow
cervix, uterineLow
duodenumLow
endometrium 1Low
endometrium 2Low
esophagusLow
fallopian tubeLow
lateral ventricleLow
oral mucosaLow
placentaLow
rectumLow
skin 1Low
skin 2Low
small intestineLow
spleenLow
stomach 2Low
testisHigh
tonsilLow
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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