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> Protein (NX_A6NFT4)
Protein (NX_A6NFT4)
Protein
Gene SymbolCCDC42B to neXtProt (NX_A6NFT4)
DescriptionCoiled-coil domain-containing protein 42B
Chromosome12
Location12q24.13 (113587663 ~ 113597081) to Ensembl
Sequene Features : Isoforms 1, Variants 14, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .N/A
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
1 14 0
2014-09-19transcript level
1 7 0
2014-05-27transcript level
1 7 0
2014-02-25transcript level
1 7 0
2013-12-09transcript level
1 4 0
2013-11-01transcript level
1 4 0
2013-09-12transcript level
1 4 0
2013-08-17transcript level
1 4 0
2013-07-15transcript level
1 2 0
2013-06-11transcript level
1 2 0
2013-02-12transcript level
1 2 0
2012-12-20transcript level
1 2 0
2012-10-30transcript level
1 3 0
2012-10-07transcript level
1 3 0
2012-08-24transcript level
1 3 0
2012-07-28transcript level
1 3 0
2012-06-08transcript level
1 3 0
2012-05-07transcript level
1 3 0
2012-04-10transcript level
1 3 0
2012-01-13transcript level
1 4 0
2011-12-20transcript level
1 4 0
2011-11-11transcript level
1 4 0
2011-08-23transcript level
1 4 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_A6NFT4-1
12 0 0 35891.9438
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
ascites25
blood8
brain3
cervix41
embryonic tissue4
eye4
intestine8
lung8
lymph45
lymph node11
placenta10
testis4
uterus8
Health State
TissuesTPM*
normal7
colorectal tumor8
gastrointestinal tumor8
germ cell tumor3
lymphoma27
non-neoplasia10
uterine tumor22
Developmental Stage
TissuesTPM*
adult4
fetus8
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
lung2.8
skin1.4
stomach2.1
Tissues
TissuesExpression level
appendixMedium
bronchusHigh
cerebellumMedium
cerebral cortexLow
colonMedium
duodenumMedium
fallopian tubeHigh
kidneyLow
liverMedium
nasopharynxHigh
pancreasLow
rectumMedium
skeletal muscleMedium
small intestineMedium
soft tissue 1Low
stomach 1Low
stomach 2Low
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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