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> Protein (NX_A6NFY7)
Protein (NX_A6NFY7)
Protein
Gene SymbolSDHAF1 to neXtProt (NX_A6NFY7)
DescriptionSuccinate dehydrogenase assembly factor 1, mitochondrial
Chromosome19
Location19q13.12 (36486090 ~ 36487220) to Ensembl
Sequene Features : Isoforms 1, Variants 6, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.mitochondrial respiratory chain complex II assembly
.iron-sulfur cluster assembly
.N/A .mitochondrial matrix
.mitochondrion
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 6 1
2014-09-19protein level
1 4 1
2014-05-27protein level
1 4 1
2014-02-25protein level
1 4 0
2013-12-09protein level
1 4 0
2013-11-01protein level
1 4 0
2013-09-12protein level
1 4 0
2013-08-17protein level
1 4 0
2013-07-15protein level
1 4 0
2013-06-11protein level
1 4 0
2013-02-12protein level
1 4 0
2012-12-20protein level
1 2 0
2012-10-30protein level
1 4 0
2012-10-07protein level
1 4 0
2012-08-24protein level
1 4 0
2012-07-28protein level
1 4 0
2012-06-08protein level
1 5 0
2012-05-07protein level
1 5 0
2012-04-10protein level
1 5 0
2012-01-13protein level
1 5 0
2011-12-20protein level
1 5 0
2011-11-11protein level
1 5 0
2011-08-23protein level
1 5 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_A6NFY7-1
4 0 0 12798.6036
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
blood8
bone41
brain26
cervix20
connective tissue6
embryonic tissue14
eye28
intestine56
kidney14
liver9
lung32
lymph45
lymph node22
mammary gland26
muscle9
ovary78
pancreas28
parathyroid48
placenta7
skin56
spleen37
testis9
thyroid21
uterus30
Health State
TissuesTPM*
normal16
bladder carcinoma113
breast (mammary gland) tumor32
cervical tumor28
chondrosarcoma36
colorectal tumor26
gastrointestinal tumor16
germ cell tumor3
glioma74
liver tumor10
lung tumor68
lymphoma27
ovarian tumor91
pancreatic tumor38
primitive neuroectodermal tumor of the CNS7
retinoblastoma43
skin tumor79
soft tissue/muscle tissue tumor23
uterine tumor55
Developmental Stage
TissuesTPM*
adult19
embryoid body28
fetus26
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue5.3
adrenal gland7.8
appendix5.9
bone marrow2.5
cerebral cortex6.3
colon8.7
duodenum10.6
esophagus4.3
gallbladder5
heart muscle4.8
kidney8.9
liver5.2
lung5.7
lymph node8.9
ovary6
pancreas5.3
placenta5.2
prostate6.4
salivary gland9.5
skin4.3
small intestine9.5
spleen7.9
stomach9.1
testis4.8
thyroid gland6.2
urinary bladder5.1
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Disease
No.Disease DescriptionRef.
1(#252011, phenotype) Mitochondrial complex ii deficiencyOMIM
2(*612848, gene) Succinate dehydrogenase complex assembly factor 1; SDHAF1OMIM


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