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> Protein (NX_A8MV65)
Protein (NX_A8MV65)
Protein
Gene SymbolVGLL3 to neXtProt (NX_A8MV65)
DescriptionTranscription cofactor vestigial-like protein 3
Chromosome3
Location3p12.1 (86987119 ~ 87040269) to Ensembl
Sequene Features : Isoforms 2, Variants 72, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.regulation of transcription, DNA-templated
.transcription, DNA-templated
.N/A .nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
2 72 0
2014-09-19transcript level
2 52 0
2014-05-27transcript level
2 52 0
2014-02-25transcript level
2 51 0
2013-12-09transcript level
2 41 0
2013-11-01transcript level
2 40 0
2013-09-12transcript level
2 40 0
2013-08-17transcript level
2 40 0
2013-07-15transcript level
2 25 0
2013-06-11transcript level
2 25 0
2013-02-12transcript level
2 5 0
2012-12-20transcript level
2 5 0
2012-10-30transcript level
2 6 0
2012-10-07transcript level
2 6 0
2012-08-24transcript level
2 4 0
2012-07-28transcript level
2 4 0
2012-06-08transcript level
2 4 0
2012-05-07transcript level
2 4 0
2012-04-10transcript level
2 4 0
2012-01-13transcript level
2 5 0
2011-12-20transcript level
2 5 0
2011-11-11transcript level
2 5 0
2011-08-23transcript level
2 5 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_A8MV65-1
1 12 0 35985.8936
NX_A8MV65-2
1 12 0 35148.476
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue310
ascites25
bladder33
bone marrow82
brain8
connective tissue33
embryonic tissue46
intestine8
liver9
lung14
mammary gland13
muscle28
nerve128
pancreas4
placenta455
prostate10
skin28
testis11
trachea19
uterus17
vascular19
Health State
TissuesTPM*
normal57
chondrosarcoma48
gastrointestinal tumor8
germ cell tumor7
glioma9
liver tumor20
non-neoplasia10
pancreatic tumor9
uterine tumor22
Developmental Stage
TissuesTPM*
adult67
embryoid body71
blastocyst48
fetus10
juvenile35
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue18
adrenal gland1.4
appendix3.2
colon2.5
esophagus2.9
gallbladder10.2
heart muscle1.5
kidney1.5
lung10.8
lymph node2.1
ovary13.6
pancreas2
placenta77.2
prostate12.7
skin2
small intestine1.1
spleen1.2
testis4.2
urinary bladder6.8
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*609980, gene) Vestigial-like 3; VGLL3OMIM


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