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> Protein (NX_B3KS81)
Protein (NX_B3KS81)
Protein
Gene SymbolSRRM5 to neXtProt (NX_B3KS81)
DescriptionSerine/arginine repetitive matrix protein 5
Chromosome19
Location19q13.31 (44100769 ~ 44118649) to Ensembl
Sequene Features : Isoforms 1, Variants 61, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .N/A
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 61 0
2014-09-19protein level
1 53 0
2014-05-27protein level
1 53 0
2014-02-25protein level
1 53 0
2013-12-09protein level
1 41 0
2013-11-01protein level
1 41 0
2013-09-12protein level
1 41 0
2013-08-17protein level
1 41 0
2013-07-15protein level
1 30 0
2013-06-11protein level
1 30 0
2013-02-12transcript level
1 20 0
2012-12-20transcript level
1 21 0
2012-10-30transcript level
1 28 0
2012-10-07transcript level
1 28 0
2012-08-24transcript level
1 27 0
2012-07-28transcript level
1 26 0
2012-06-08transcript level
1 31 0
2012-05-07transcript level
1 31 0
2012-04-10transcript level
1 31 0
2012-01-13transcript level
1 20 0
2011-12-20transcript level
1 20 0
2011-11-11transcript level
1 20 0
2011-08-23transcript level
1 20 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_B3KS81-1
21 0 0 80307.6308
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
blood8
brain2
embryonic tissue4
eye9
intestine4
lung2
pancreas9
salivary gland49
spleen18
testis27
Health State
TissuesTPM*
normal4
colorectal tumor8
head and neck tumor7
leukemia10
lung tumor9
pancreatic tumor19
Developmental Stage
TissuesTPM*
adult3
embryoid body14
fetus1
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
lymph node1.1
prostate1.1
testis22.1
Tissues
TissuesExpression level
adrenal glandHigh
appendixLow
breastMedium
bronchusMedium
cerebellumMedium
cerebral cortexMedium
cervix, uterineMedium
colonMedium
duodenumMedium
epididymisLow
esophagusMedium
fallopian tubeMedium
gallbladderMedium
heart muscleMedium
hippocampusMedium
kidneyMedium
lateral ventricleMedium
lungLow
nasopharynxLow
oral mucosaMedium
pancreasMedium
prostateLow
rectumMedium
seminal vesicleMedium
skeletal muscleLow
skin 1Low
skin 2Low
small intestineMedium
smooth muscleMedium
soft tissue 1Low
stomach 1High
stomach 2High
testisHigh
tonsilLow
urinary bladderMedium
vaginaLow
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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