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> Protein (NX_B4DS77)
Protein (NX_B4DS77)
Protein
Gene SymbolSHISA9 to neXtProt (NX_B4DS77)
DescriptionProtein shisa-9
Chromosome16
Location16p13.12 (12995477 ~ 13334272) to Ensembl
Sequene Features : Isoforms 3, Variants 40, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.regulation of short-term neuronal synaptic plasticity .N/A .synapse
.dendritic spine membrane
.alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
  + 2 more...
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
3 40 3
2014-09-19protein level
3 30 3
2014-05-27transcript level
3 30 3
2014-02-25transcript level
3 30 3
2013-12-09transcript level
3 27 3
2013-11-01transcript level
3 27 3
2013-09-12transcript level
3 27 3
2013-08-17transcript level
3 27 3
2013-07-15transcript level
3 15 3
2013-06-11transcript level
3 15 3
2013-02-12transcript level
3 6 8
2012-12-20transcript level
3 8 8
2012-10-30transcript level
3 8 8
2012-10-07transcript level
3 8 3
2012-08-24transcript level
3 6 3
2012-07-28transcript level
3 6 3
2012-06-08transcript level
3 6 3
2012-05-07transcript level
3 6 3
2012-04-10transcript level
3 6 3
2012-01-13transcript level
3 4 3
2011-12-20transcript level
3 4 3
2011-11-11transcript level
3 4 3
2011-08-23transcript level
3 4 3
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_B4DS77-1
0 19 0 46895.1045
NX_B4DS77-2
1 14 0 38557.9396
NX_B4DS77-3
1 8 0 24408.9457
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
brain21
embryonic tissue9
eye23
kidney9
larynx42
lung2
mammary gland6
prostate5
skin4
testis4
Health State
TissuesTPM*
normal9
germ cell tumor22
glioma55
head and neck tumor7
kidney tumor14
primitive neuroectodermal tumor of the CNS7
retinoblastoma21
skin tumor7
Developmental Stage
TissuesTPM*
adult3
blastocyst16
fetus14
juvenile17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adrenal gland2.8
cerebral cortex14
kidney1.9
prostate5.9
thyroid gland3.3
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*613346, gene) Shisa, xenopus, homolog of, 9; SHISA9OMIM


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