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> Protein (NX_O00160)
Protein (NX_O00160)
Protein
Gene SymbolMYO1F to neXtProt (NX_O00160)
DescriptionUnconventional myosin-If
Chromosome19
Location19p13.2 (8585674 ~ 8642461) to Ensembl
Sequene Features : Isoforms 1, Variants 156, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.defense response to Gram-positive bacterium
.regulation of innate immune response
.neutrophil degranulation
  + 3 more...
.ATP binding
.actin binding
.motor activity
.filamentous actin
.cortical actin cytoskeleton
.unconventional myosin complex
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 156 7
2014-09-19protein level
1 104 7
2014-05-27protein level
1 104 10
2014-02-25protein level
1 103 10
2013-12-09protein level
1 70 10
2013-11-01protein level
1 69 4
2013-09-12protein level
1 69 4
2013-08-17protein level
1 69 4
2013-07-15protein level
1 38 4
2013-06-11protein level
1 38 4
2013-02-12protein level
1 14 4
2012-12-20protein level
1 14 4
2012-10-30protein level
1 17 4
2012-10-07protein level
1 17 4
2012-08-24protein level
1 10 4
2012-07-28protein level
1 10 4
2012-06-08protein level
1 27 4
2012-05-07protein level
1 27 4
2012-04-10protein level
1 27 4
2012-01-13protein level
1 24 4
2011-12-20protein level
1 24 4
2011-11-11protein level
1 24 3
2011-08-23protein level
1 24 3
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_O00160-1
46 0 7 124765.4725
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland30
blood286
bone13
bone marrow82
brain9
connective tissue20
eye9
intestine8
kidney28
lung17
lymph22
lymph node11
mammary gland6
mouth15
ovary9
pancreas18
pharynx49
placenta17
prostate5
spleen318
testis6
thymus12
thyroid21
uterus12
Health State
TissuesTPM*
normal20
chondrosarcoma12
germ cell tumor30
glioma27
head and neck tumor14
kidney tumor72
leukemia264
lung tumor19
lymphoma13
non-neoplasia20
ovarian tumor13
pancreatic tumor19
prostate cancer9
uterine tumor33
Developmental Stage
TissuesTPM*
adult36
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue14.3
adrenal gland5.9
appendix62.3
bone marrow98
cerebral cortex6.2
colon8.2
duodenum10.7
esophagus4.7
gallbladder17.9
heart muscle4.2
kidney2.7
liver6.7
lung26.2
lymph node29.8
ovary3.6
pancreas1.9
placenta11.2
prostate4.1
salivary gland5.5
skin5.9
small intestine17
spleen80.6
stomach13.1
testis3.6
thyroid gland4
urinary bladder21.1
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*601480, gene) Myosin if; MYO1FOMIM


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