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> Protein (NX_O00458)
Protein (NX_O00458)
Protein
Gene SymbolIFRD1 to neXtProt (NX_O00458)
DescriptionInterferon-related developmental regulator 1
Chromosome7
Location7q31.1 (112063023 ~ 112121072) to Ensembl
Sequene Features : Isoforms 2, Variants 51, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.adult somatic muscle development
.myoblast fate determination
.multicellular organismal development
.N/A .nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 51 2
2014-09-19protein level
2 40 2
2014-05-27protein level
2 40 2
2014-02-25protein level
2 39 2
2013-12-09protein level
2 32 2
2013-11-01protein level
2 31 0
2013-09-12protein level
2 31 0
2013-08-17protein level
2 31 0
2013-07-15protein level
2 19 0
2013-06-11protein level
2 19 0
2013-02-12protein level
2 10 1
2012-12-20protein level
2 9 1
2012-10-30protein level
2 11 1
2012-10-07protein level
2 11 1
2012-08-24protein level
1 11 1
2012-07-28protein level
1 11 1
2012-06-08protein level
1 18 1
2012-05-07protein level
1 12 1
2012-04-10protein level
1 12 1
2012-01-13protein level
1 9 1
2011-12-20protein level
1 9 1
2011-11-11protein level
1 9 1
2011-08-23protein level
1 9 1
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_O00458-1
2 17 0 50236.2156
NX_O00458-2
1 17 0 45306.8627
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland60
ascites150
bladder66
blood40
bone69
bone marrow82
brain51
cervix164
connective tissue120
embryonic tissue9
esophagus99
eye81
heart44
intestine47
kidney18
liver58
lung56
lymph22
lymph node66
mammary gland33
muscle47
nerve64
ovary49
pancreas32
parathyroid194
pituitary gland242
placenta70
prostate5
salivary gland197
skin52
spleen18
stomach10
testis82
thymus25
thyroid107
trachea57
uterus47
Health State
TissuesTPM*
normal61
adrenal tumor79
bladder carcinoma113
breast (mammary gland) tumor32
cervical tumor231
chondrosarcoma60
colorectal tumor17
esophageal tumor115
gastrointestinal tumor67
germ cell tumor3
glioma27
head and neck tumor59
kidney tumor29
leukemia63
liver tumor41
lung tumor68
lymphoma41
non-neoplasia41
ovarian tumor39
pancreatic tumor38
primitive neuroectodermal tumor of the CNS62
prostate cancer28
retinoblastoma129
skin tumor63
soft tissue/muscle tissue tumor111
uterine tumor55
Developmental Stage
TissuesTPM*
adult65
embryoid body28
blastocyst48
neonate32
fetus84
infant85
juvenile17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue33.7
adrenal gland50.4
appendix30.3
bone marrow177.4
cerebral cortex26.5
colon23.8
duodenum38.6
esophagus23.5
gallbladder33
heart muscle22.2
kidney22.2
liver17.9
lung28.1
lymph node18.8
ovary23.2
pancreas89.2
placenta31.5
prostate32.2
salivary gland24.9
skin24.7
small intestine31.7
spleen24.9
stomach24.4
testis39.2
thyroid gland34.2
urinary bladder24.1
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*603502, gene) Interferon-related developmental regulator 1; IFRD1OMIM


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