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> Protein (NX_O14562)
Protein (NX_O14562)
Protein
Gene SymbolUBFD1 to neXtProt (NX_O14562)
DescriptionUbiquitin domain-containing protein UBFD1
Chromosome16
Location16p12.2 (23568392 ~ 23585710) to Ensembl
Sequene Features : Isoforms 1, Variants 22, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .poly(A) RNA binding .N/A
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 22 8
2014-09-19protein level
1 14 8
2014-05-27protein level
1 14 8
2014-02-25protein level
1 14 8
2013-12-09protein level
1 12 9
2013-11-01protein level
1 12 4
2013-09-12protein level
1 12 4
2013-08-17protein level
1 12 4
2013-07-15protein level
1 6 0
2013-06-11protein level
1 6 0
2013-02-12protein level
1 0 0
2012-12-20protein level
1 0 0
2012-10-30protein level
1 0 0
2012-10-07protein level
1 0 0
2012-08-24protein level
1 0 0
2012-07-28protein level
1 0 0
2012-06-08protein level
1 0 0
2012-05-07protein level
1 1 0
2012-04-10protein level
1 1 0
2012-01-13protein level
1 1 0
2011-12-20protein level
1 1 0
2011-11-11protein level
1 1 0
2011-08-23protein level
1 1 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_O14562-1
10 0 0 33360.7544
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue77
adrenal gland30
ascites50
bladder100
blood16
bone27
brain75
connective tissue20
ear62
embryonic tissue164
eye95
heart78
intestine56
kidney61
larynx85
liver48
lung62
lymph225
lymph node211
mammary gland79
mouth30
muscle47
nerve64
ovary88
pancreas112
parathyroid97
placenta21
prostate36
skin61
spleen37
stomach31
testis124
thymus112
thyroid21
tonsil58
trachea19
umbilical cord145
uterus107
vascular19
Health State
TissuesTPM*
normal83
adrenal tumor79
bladder carcinoma113
breast (mammary gland) tumor53
chondrosarcoma36
colorectal tumor35
gastrointestinal tumor42
germ cell tumor174
glioma55
head and neck tumor37
kidney tumor58
leukemia21
liver tumor72
lung tumor68
lymphoma138
non-neoplasia20
ovarian tumor91
pancreatic tumor95
primitive neuroectodermal tumor of the CNS31
prostate cancer48
retinoblastoma150
skin tumor39
soft tissue/muscle tissue tumor111
uterine tumor77
Developmental Stage
TissuesTPM*
adult58
embryoid body242
blastocyst113
neonate64
fetus120
juvenile53
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue14.8
adrenal gland18.6
appendix16.9
bone marrow10.3
cerebral cortex18.2
colon12.8
duodenum8.6
esophagus14.6
gallbladder15.3
heart muscle18.3
kidney15.9
liver8.7
lung12.2
lymph node15.3
ovary19.5
pancreas7.7
placenta20.9
prostate18.3
salivary gland10.8
skin10
small intestine9.6
spleen15.3
stomach13
testis36.2
thyroid gland21
urinary bladder17.6
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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