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> Protein (NX_O14967)
Protein (NX_O14967)
Protein
Gene SymbolCLGN to neXtProt (NX_O14967)
DescriptionCalmegin
Chromosome4
Location4q31.1 (141309609 ~ 141349122) to Ensembl
Sequene Features : Isoforms 2, Variants 105, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.binding of sperm to zona pellucida
.single fertilization
.protein complex assembly
.protein folding
.unfolded protein binding
.calcium ion binding
.integral component of membrane
.endoplasmic reticulum membrane
.endoplasmic reticulum
.nuclear envelope
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 105 6
2014-09-19protein level
2 74 6
2014-05-27protein level
1 74 6
2014-02-25protein level
1 72 6
2013-12-09protein level
1 57 6
2013-11-01protein level
1 51 6
2013-09-12protein level
1 51 6
2013-08-17protein level
1 51 6
2013-07-15protein level
1 37 6
2013-06-11protein level
1 37 6
2013-02-12protein level
1 21 6
2012-12-20protein level
1 20 6
2012-10-30protein level
1 24 6
2012-10-07protein level
1 24 6
2012-08-24protein level
1 18 6
2012-07-28protein level
1 18 6
2012-06-08protein level
1 18 6
2012-05-07protein level
1 18 6
2012-04-10protein level
1 18 6
2012-01-13protein level
1 12 6
2011-12-20protein level
1 12 6
2011-11-11protein level
1 12 6
2011-08-23protein level
1 12 6
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_O14967-1
10 19 0 69994.2459
NX_O14967-2
2 19 0 46423.5621
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland30
blood32
bone13
brain20
connective tissue6
embryonic tissue9
eye19
heart33
kidney14
liver19
lung11
lymph node22
mammary gland19
pancreas28
pharynx49
prostate26
testis222
uterus8
Health State
TissuesTPM*
normal31
adrenal tumor79
breast (mammary gland) tumor32
germ cell tumor26
kidney tumor14
leukemia10
lung tumor9
primitive neuroectodermal tumor of the CNS39
prostate cancer38
retinoblastoma21
soft tissue/muscle tissue tumor7
uterine tumor22
Developmental Stage
TissuesTPM*
adult12
blastocyst16
fetus26
juvenile17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adrenal gland6.7
bone marrow1.4
cerebral cortex2.9
heart muscle40.8
prostate22.1
stomach1.1
testis86.1
thyroid gland3
Tissues
TissuesExpression level
adrenal glandLow
appendixLow
breastLow
bronchusMedium
cerebellumMedium
cerebral cortexMedium
cervix, uterineLow
colonMedium
duodenumLow
endometrium 1Medium
endometrium 2Medium
epididymisMedium
fallopian tubeHigh
gallbladderLow
heart muscleMedium
hippocampusMedium
kidneyLow
lateral ventricleLow
liverLow
lungLow
nasopharynxMedium
ovaryMedium
pancreasMedium
placentaMedium
prostateMedium
rectumMedium
skeletal muscleLow
soft tissue 1Low
soft tissue 2Low
testisHigh
thyroid glandLow
tonsilLow
urinary bladderLow
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*601858, gene) Calmegin; CLGNOMIM


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