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| Protein |
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| Gene Symbol | SCAMP1 to neXtProt (NX_O15126) |
| Description | Secretory carrier-associated membrane protein 1 |
| Chromosome | 5 |
| Location | 5q14.1 (77656339 ~ 77776562) to Ensembl |
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Sequene Features : Isoforms 2, Variants 5, PTMs 5 to neXtProt Sequence Features
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Gene
Ontologies |
| GO: Biological Process |
GO: Mulecular Function |
GO: Cellular Component |
|
.protein transport
.endocytosis
.post-Golgi vesicle-mediated transport
.exocytosis |
.N/A |
.recycling endosome membrane
.zymogen granule membrane
.synaptic vesicle membrane
+ 3 more... |
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| |
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| Proteomic Evidences |
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| |
|
| Release | | Protein Evidence | | Pr | | Ab | | Isoforms | | Variants | | PTMs |
|
| 2015-01-01 | | protein level | | | | | | | 2 |
| 5 |
| 5 |
|
| 2014-09-19 | | protein level | | | | | | | 2 |
| 5 |
| 5 |
|
| 2014-05-27 | | protein level | | | | | | | 2 |
| 5 |
| 5 |
|
| 2014-02-25 | | protein level | | | | | | | 2 |
| 5 |
| 5 |
|
| 2013-12-09 | | protein level | | | | | | | 2 |
| 1 |
| 5 |
|
| 2013-11-01 | | protein level | | | | | | | 2 |
| 1 |
| 3 |
|
| 2013-09-12 | | protein level | | | | | | | 2 |
| 1 |
| 3 |
|
| 2013-08-17 | | protein level | | | | | | | 2 |
| 0 |
| 3 |
|
| 2013-07-15 | | protein level | | | | | | | 2 |
| 0 |
| 0 |
|
| 2013-06-11 | | protein level | | | | | | | 2 |
| 0 |
| 0 |
|
| 2013-02-12 | | protein level | | | | | | | 2 |
| 0 |
| 0 |
|
| 2012-12-20 | | protein level | | | | | | | 2 |
| 0 |
| 0 |
|
| 2012-10-30 | | protein level | | | | | | | 2 |
| 0 |
| 0 |
|
| 2012-10-07 | | protein level | | | | | | | 2 |
| 0 |
| 0 |
|
| 2012-08-24 | | protein level | | | | | | | 2 |
| 0 |
| 0 |
|
| 2012-07-28 | | protein level | | | | | | | 2 |
| 0 |
| 0 |
|
| 2012-06-08 | | protein level | | | | | | | 2 |
| 5 |
| 0 |
|
| 2012-05-07 | | protein level | | | | | | | 2 |
| 5 |
| 0 |
|
| 2012-04-10 | | protein level | | | | | | | 2 |
| 5 |
| 0 |
|
| 2012-01-13 | | protein level | | | | | | | 2 |
| 5 |
| 0 |
|
| 2011-12-20 | | protein level | | | | | | | 2 |
| 5 |
| 0 |
|
| 2011-11-11 | | protein level | | | | | | | 2 |
| 5 |
| 0 |
|
| 2011-08-23 | | protein level | | | | | | | 2 |
| 5 |
| 0 |
|
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| |
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| Protein Isoforms |
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| |
| |
|
| : Uniquely mapped peptide | | : Gene-specific peptide | | : Shared peptide |
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| Interacting Partners |
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| No. |
Exp. ref. |
Symbol |
|
PE |
Pr |
Ab |
Di |
|
GO: Biological Process |
GO: Mulecular Function |
GO: Cellular Component |
|
| 1 |
EBI-954338,EBI-10172380 |
FAM208B |
|
| | | | |
.N/A |
.N/A |
.cytoplasm
.nucleoplasm
.nucleus |
|
| 2 |
EBI-954338,EBI-10182121 |
ZMIZ2 |
|
| | | | |
.positive regulation of transcription from RNA polymerase II promoter
.transcription, DNA-templated |
.ligand-dependent nuclear receptor transcription coactivator activity
.zinc ion binding |
.nuclear replication fork
.mitochondrion
.nucleoplasm
.nucleus |
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| |
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| EST expression level of Protein Coding Gene (ref. NCBI UniGene EST) |
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| Body Sites | |
| Tissues | TPM* | |
|
| adipose tissue | 155 | |
| adrenal gland | 60 | |
| ascites | 50 | |
| bladder | 468 | |
| blood | 49 | |
| bone | 27 | |
| bone marrow | 61 | |
| brain | 170 | |
| cervix | 20 | |
| connective tissue | 46 | |
| embryonic tissue | 37 | |
| esophagus | 49 | |
| eye | 81 | |
| heart | 33 | |
| intestine | 38 | |
| kidney | 113 | |
| liver | 29 | |
| lung | 41 | |
| lymph | 22 | |
| lymph node | 77 | |
| mammary gland | 33 | |
| mouth | 151 | |
| muscle | 47 | |
| nerve | 64 | |
| ovary | 29 | |
| pancreas | 84 | |
| pharynx | 24 | |
| pituitary gland | 242 | |
| placenta | 67 | |
| prostate | 58 | |
| salivary gland | 49 | |
| skin | 33 | |
| spleen | 56 | |
| stomach | 10 | |
| testis | 68 | |
| thymus | 50 | |
| thyroid | 42 | |
| trachea | 308 | |
| uterus | 64 | |
| vascular | 77 | |
|
| Health State | |
| Tissues | TPM* | |
|
| normal | 84 | |
| adrenal tumor | 158 | |
| bladder carcinoma | 739 | |
| breast (mammary gland) tumor | 21 | |
| cervical tumor | 28 | |
| chondrosarcoma | 24 | |
| colorectal tumor | 53 | |
| esophageal tumor | 57 | |
| gastrointestinal tumor | 33 | |
| germ cell tumor | 83 | |
| glioma | 18 | |
| head and neck tumor | 67 | |
| kidney tumor | 116 | |
| leukemia | 63 | |
| liver tumor | 41 | |
| lung tumor | 38 | |
| lymphoma | 13 | |
| non-neoplasia | 72 | |
| ovarian tumor | 39 | |
| pancreatic tumor | 85 | |
| primitive neuroectodermal tumor of the CNS | 39 | |
| prostate cancer | 48 | |
| retinoblastoma | 107 | |
| skin tumor | 15 | |
| soft tissue/muscle tissue tumor | 31 | |
| uterine tumor | 55 | |
|
| Developmental Stage | |
| Tissues | TPM* | |
|
| adult | 48 | |
| embryoid body | 28 | |
| blastocyst | 48 | |
| fetus | 82 | |
| infant | 127 | |
| juvenile | 35 | |
|
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags. |
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| Expression level of Protein (ref. Human Protein Atlas) |
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| RNA-Seq. | |
| Tissues | FPKM | |
|
| adipose tissue | 14.3 | |
| adrenal gland | 21.1 | |
| appendix | 11.9 | |
| bone marrow | 5.3 | |
| cerebral cortex | 41.3 | |
| colon | 18.2 | |
| duodenum | 12.6 | |
| esophagus | 23.8 | |
| gallbladder | 19.4 | |
| heart muscle | 17.5 | |
| kidney | 21 | |
| liver | 9.8 | |
| lung | 15.6 | |
| lymph node | 12 | |
| ovary | 21.1 | |
| pancreas | 12.1 | |
| placenta | 16.8 | |
| prostate | 27.1 | |
| salivary gland | 21.1 | |
| skin | 13.2 | |
| small intestine | 14.6 | |
| spleen | 11.3 | |
| stomach | 22.4 | |
| testis | 13.9 | |
| thyroid gland | 37.3 | |
| urinary bladder | 28.7 | |
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| RNA-seq colour codes |
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Highly expressed RNAs (FPKM >50) | |
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Moderately expressed RNAs (50> FPKM >10) | |
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Lower expressed RNAs (10> FPKM >1) | |
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The lowest expressed RNAs (FPKM value of 0 or 1) |
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| Disease |
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| No. | Disease Description | Ref. |
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| 1 | (*606911, gene) Secretory carrier membrane protein 1; SCAMP1 | OMIM |
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> Protein (NX_O15126)