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Protein |
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Gene Symbol | SCAMP1 to neXtProt (NX_O15126) |
Description | Secretory carrier-associated membrane protein 1 |
Chromosome | 5 |
Location | 5q14.1 (77656339 ~ 77776562) to Ensembl |
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Sequene Features : Isoforms 2, Variants 5, PTMs 5 to neXtProt Sequence Features
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Gene Ontologies |
GO: Biological Process |
GO: Mulecular Function |
GO: Cellular Component |
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.protein transport .endocytosis .post-Golgi vesicle-mediated transport .exocytosis |
.N/A |
.recycling endosome membrane .zymogen granule membrane .synaptic vesicle membrane + 3 more... |
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Proteomic Evidences |
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Release | | Protein Evidence | | Pr | | Ab | | Isoforms | | Variants | | PTMs |
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2015-01-01 | | protein level | | | | | | | 2 |
| 5 |
| 5 |
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2014-09-19 | | protein level | | | | | | | 2 |
| 5 |
| 5 |
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2014-05-27 | | protein level | | | | | | | 2 |
| 5 |
| 5 |
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2014-02-25 | | protein level | | | | | | | 2 |
| 5 |
| 5 |
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2013-12-09 | | protein level | | | | | | | 2 |
| 1 |
| 5 |
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2013-11-01 | | protein level | | | | | | | 2 |
| 1 |
| 3 |
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2013-09-12 | | protein level | | | | | | | 2 |
| 1 |
| 3 |
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2013-08-17 | | protein level | | | | | | | 2 |
| 0 |
| 3 |
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2013-07-15 | | protein level | | | | | | | 2 |
| 0 |
| 0 |
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2013-06-11 | | protein level | | | | | | | 2 |
| 0 |
| 0 |
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2013-02-12 | | protein level | | | | | | | 2 |
| 0 |
| 0 |
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2012-12-20 | | protein level | | | | | | | 2 |
| 0 |
| 0 |
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2012-10-30 | | protein level | | | | | | | 2 |
| 0 |
| 0 |
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2012-10-07 | | protein level | | | | | | | 2 |
| 0 |
| 0 |
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2012-08-24 | | protein level | | | | | | | 2 |
| 0 |
| 0 |
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2012-07-28 | | protein level | | | | | | | 2 |
| 0 |
| 0 |
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2012-06-08 | | protein level | | | | | | | 2 |
| 5 |
| 0 |
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2012-05-07 | | protein level | | | | | | | 2 |
| 5 |
| 0 |
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2012-04-10 | | protein level | | | | | | | 2 |
| 5 |
| 0 |
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2012-01-13 | | protein level | | | | | | | 2 |
| 5 |
| 0 |
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2011-12-20 | | protein level | | | | | | | 2 |
| 5 |
| 0 |
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2011-11-11 | | protein level | | | | | | | 2 |
| 5 |
| 0 |
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2011-08-23 | | protein level | | | | | | | 2 |
| 5 |
| 0 |
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Protein Isoforms |
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| : Uniquely mapped peptide | | : Gene-specific peptide | | : Shared peptide |
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Interacting Partners |
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No. |
Exp. ref. |
Symbol |
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PE |
Pr |
Ab |
Di |
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GO: Biological Process |
GO: Mulecular Function |
GO: Cellular Component |
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1 |
EBI-954338,EBI-10172380 |
FAM208B |
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.N/A |
.N/A |
.cytoplasm .nucleoplasm .nucleus |
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2 |
EBI-954338,EBI-10182121 |
ZMIZ2 |
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.positive regulation of transcription from RNA polymerase II promoter .transcription, DNA-templated |
.ligand-dependent nuclear receptor transcription coactivator activity .zinc ion binding |
.nuclear replication fork .mitochondrion .nucleoplasm .nucleus |
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EST expression level of Protein Coding Gene (ref. NCBI UniGene EST) |
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Body Sites | |
Tissues | TPM* | |
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adipose tissue | 155 | |
adrenal gland | 60 | |
ascites | 50 | |
bladder | 468 | |
blood | 49 | |
bone | 27 | |
bone marrow | 61 | |
brain | 170 | |
cervix | 20 | |
connective tissue | 46 | |
embryonic tissue | 37 | |
esophagus | 49 | |
eye | 81 | |
heart | 33 | |
intestine | 38 | |
kidney | 113 | |
liver | 29 | |
lung | 41 | |
lymph | 22 | |
lymph node | 77 | |
mammary gland | 33 | |
mouth | 151 | |
muscle | 47 | |
nerve | 64 | |
ovary | 29 | |
pancreas | 84 | |
pharynx | 24 | |
pituitary gland | 242 | |
placenta | 67 | |
prostate | 58 | |
salivary gland | 49 | |
skin | 33 | |
spleen | 56 | |
stomach | 10 | |
testis | 68 | |
thymus | 50 | |
thyroid | 42 | |
trachea | 308 | |
uterus | 64 | |
vascular | 77 | |
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Health State | |
Tissues | TPM* | |
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normal | 84 | |
adrenal tumor | 158 | |
bladder carcinoma | 739 | |
breast (mammary gland) tumor | 21 | |
cervical tumor | 28 | |
chondrosarcoma | 24 | |
colorectal tumor | 53 | |
esophageal tumor | 57 | |
gastrointestinal tumor | 33 | |
germ cell tumor | 83 | |
glioma | 18 | |
head and neck tumor | 67 | |
kidney tumor | 116 | |
leukemia | 63 | |
liver tumor | 41 | |
lung tumor | 38 | |
lymphoma | 13 | |
non-neoplasia | 72 | |
ovarian tumor | 39 | |
pancreatic tumor | 85 | |
primitive neuroectodermal tumor of the CNS | 39 | |
prostate cancer | 48 | |
retinoblastoma | 107 | |
skin tumor | 15 | |
soft tissue/muscle tissue tumor | 31 | |
uterine tumor | 55 | |
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Developmental Stage | |
Tissues | TPM* | |
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adult | 48 | |
embryoid body | 28 | |
blastocyst | 48 | |
fetus | 82 | |
infant | 127 | |
juvenile | 35 | |
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TPM*: Transcripts per million; transcript expression level measured by expression sequence tags. |
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Expression level of Protein (ref. Human Protein Atlas) |
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RNA-Seq. | |
Tissues | FPKM | |
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adipose tissue | 14.3 | |
adrenal gland | 21.1 | |
appendix | 11.9 | |
bone marrow | 5.3 | |
cerebral cortex | 41.3 | |
colon | 18.2 | |
duodenum | 12.6 | |
esophagus | 23.8 | |
gallbladder | 19.4 | |
heart muscle | 17.5 | |
kidney | 21 | |
liver | 9.8 | |
lung | 15.6 | |
lymph node | 12 | |
ovary | 21.1 | |
pancreas | 12.1 | |
placenta | 16.8 | |
prostate | 27.1 | |
salivary gland | 21.1 | |
skin | 13.2 | |
small intestine | 14.6 | |
spleen | 11.3 | |
stomach | 22.4 | |
testis | 13.9 | |
thyroid gland | 37.3 | |
urinary bladder | 28.7 | |
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RNA-seq colour codes |
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Highly expressed RNAs (FPKM >50) |
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Moderately expressed RNAs (50> FPKM >10) |
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Lower expressed RNAs (10> FPKM >1) |
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The lowest expressed RNAs (FPKM value of 0 or 1) |
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Disease |
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No. | Disease Description | Ref. |
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1 | (*606911, gene) Secretory carrier membrane protein 1; SCAMP1 | OMIM |
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