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> Protein (NX_O15164)
Protein (NX_O15164)
Protein
Gene SymbolTRIM24 to neXtProt (NX_O15164)
DescriptionTranscription intermediary factor 1-alpha
Chromosome7
Location7q33 (138145079 ~ 138274738) to Ensembl
Sequene Features : Isoforms 2, Variants 110, PTMs 20 to neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.regulation of signal transduction by p53 class mediator
.cellular response to estrogen stimulus
.regulation of vitamin D receptor signaling pathway
  + 11 more...
.lysine-acetylated histone binding
.sequence-specific DNA binding
.estrogen response element binding
  + 8 more...
.cytosol
.perichromatin fibrils
.nuclear euchromatin
  + 2 more...
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 110 20
2014-09-19protein level
2 79 20
2014-05-27protein level
2 79 20
2014-02-25protein level
2 78 20
2013-12-09protein level
2 65 20
2013-11-01protein level
2 59 17
2013-09-12protein level
2 59 17
2013-08-17protein level
2 59 17
2013-07-15protein level
2 42 17
2013-06-11protein level
2 42 17
2013-02-12protein level
2 20 32
2012-12-20protein level
2 20 32
2012-10-30protein level
2 26 32
2012-10-07protein level
2 26 16
2012-08-24protein level
2 25 16
2012-07-28protein level
2 24 16
2012-06-08protein level
2 36 16
2012-05-07protein level
2 23 16
2012-04-10protein level
2 23 16
2012-01-13protein level
2 22 16
2011-12-20protein level
2 22 16
2011-11-11protein level
2 22 14
2011-08-23protein level
2 22 14
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_O15164-1
3 47 2 116756.8064
NX_O15164-2
1 47 2 112945.8069
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland60
ascites125
blood24
bone27
bone marrow41
brain37
connective tissue20
embryonic tissue140
eye28
heart11
intestine25
kidney33
larynx127
liver107
lung17
lymph node11
mammary gland72
mouth30
muscle28
ovary29
pancreas4
parathyroid48
pharynx24
placenta45
prostate47
skin14
stomach31
testis98
thymus75
trachea19
uterus17
vascular19
Health State
TissuesTPM*
normal37
adrenal tumor79
breast (mammary gland) tumor42
chondrosarcoma24
colorectal tumor35
gastrointestinal tumor59
germ cell tumor79
glioma83
head and neck tumor37
kidney tumor43
leukemia21
liver tumor197
lung tumor9
lymphoma13
non-neoplasia10
ovarian tumor52
pancreatic tumor9
primitive neuroectodermal tumor of the CNS7
prostate cancer48
retinoblastoma86
skin tumor15
soft tissue/muscle tissue tumor23
uterine tumor11
Developmental Stage
TissuesTPM*
adult42
embryoid body57
blastocyst244
fetus57
juvenile251
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue6
adrenal gland15.8
appendix7.2
bone marrow7.1
cerebral cortex10.3
colon8.2
duodenum9.8
esophagus9.8
gallbladder6
heart muscle8.4
kidney6.9
liver11.1
lung10.3
lymph node8
ovary29.3
pancreas6.4
placenta12.8
prostate11.8
salivary gland5.4
skin7.5
small intestine9.1
spleen6.3
stomach10.8
testis32
thyroid gland10
urinary bladder9.1
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(#188550, phenotype) Thyroid carcinoma, papillaryOMIM
2(*603406, gene) Tripartite motif-containing protein 24; TRIM24OMIM


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