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> Protein (NX_O15266)
Protein (NX_O15266)
Protein
Gene SymbolSHOX to neXtProt (NX_O15266)
DescriptionShort stature homeobox protein
ChromosomeX
LocationXp22.33 (585079 ~ 620146) to Ensembl
Sequene Features : Isoforms 2, Variants 45, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.transcription from RNA polymerase II promoter
.skeletal system development
.sequence-specific DNA binding
.sequence-specific DNA binding transcription factor activity
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 45 0
2014-09-19protein level
2 28 0
2014-05-27protein level
2 28 0
2014-02-25protein level
2 28 0
2013-12-09protein level
2 30 0
2013-11-01protein level
2 30 0
2013-09-12protein level
2 30 0
2013-08-17protein level
2 30 0
2013-07-15protein level
2 17 0
2013-06-11protein level
2 17 0
2013-02-12protein level
2 6 0
2012-12-20protein level
2 4 0
2012-10-30protein level
2 7 0
2012-10-07protein level
2 7 0
2012-08-24protein level
2 7 0
2012-07-28protein level
2 7 0
2012-06-08protein level
2 7 0
2012-05-07protein level
2 7 0
2012-04-10protein level
2 7 0
2012-01-13protein level
2 4 0
2011-12-20protein level
2 4 0
2011-11-11protein level
2 4 0
2011-08-23protein level
2 4 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_O15266-1
1 7 5 32216.1883
NX_O15266-2
1 7 4 25484.3882
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-3505698,EBI-3505701 SOX5  
  .positive regulation of mesenchymal stem cell differentiation
.cellular response to transforming growth factor beta stimulus
.positive regulation of cartilage development
  + 10 more...
.transcription regulatory region DNA binding
.sequence-specific DNA binding transcription factor activity
.sequence-specific DNA binding RNA polymerase II transcription factor activity
.nuclear transcription factor complex
2 EBI-3505698,EBI-3505706 SOX6  
  .positive regulation of mesenchymal stem cell differentiation
.cellular response to transforming growth factor beta stimulus
.positive regulation of cartilage development
  + 15 more...
.transcription regulatory region DNA binding
.sequence-specific DNA binding
.sequence-specific DNA binding transcription factor activity
.DNA binding
.nucleoplasm
.nucleus
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
eye4
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Disease
No.Disease DescriptionRef.
1(#127300, phenotype) Leri-weill dyschondrosteosis; LWDOMIM
2(#249700, phenotype) Langer mesomelic dysplasia; LMDOMIM
3(#300582, phenotype) Short stature, idiopathic, x-linked; ISSOMIM
4(*312865, gene) Short stature homeobox; SHOXOMIM
5(*400020, gene) Short stature homeobox, y-linked; SHOXYOMIM


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