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> Protein (NX_O15498)
Protein (NX_O15498)
Protein
Gene SymbolYKT6 to neXtProt (NX_O15498)
DescriptionSynaptobrevin homolog YKT6
Chromosome7
Location7p13 (44240567 ~ 44253893) to Ensembl
Sequene Features : Isoforms 2, Variants 26, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.retrograde transport, endosome to Golgi
.protein transport
.metabolic process
  + 4 more...
.protein-cysteine S-palmitoyltransferase activity
.SNAP receptor activity
.SNARE binding
.extracellular exosome
.SNARE complex
.cytoplasmic vesicle membrane
  + 8 more...
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 26 8
2014-09-19protein level
1 21 8
2014-05-27protein level
1 21 8
2014-02-25protein level
1 21 8
2013-12-09protein level
1 15 8
2013-11-01protein level
1 14 5
2013-09-12protein level
1 14 5
2013-08-17protein level
1 14 5
2013-07-15protein level
1 11 5
2013-06-11protein level
1 11 5
2013-02-12protein level
1 8 4
2012-12-20protein level
1 8 4
2012-10-30protein level
1 10 4
2012-10-07protein level
1 10 4
2012-08-24protein level
1 9 4
2012-07-28protein level
1 9 4
2012-06-08protein level
1 15 4
2012-05-07protein level
1 14 4
2012-04-10protein level
1 14 4
2012-01-13protein level
1 7 4
2011-12-20protein level
1 7 4
2011-11-11protein level
1 7 3
2011-08-23protein level
1 7 3
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_O15498-1
2 9 0 22403.3433
NX_O15498-2
0 9 0 18568.408
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland121
ascites150
bladder33
blood49
bone167
bone marrow61
brain125
cervix82
connective tissue53
embryonic tissue117
eye124
heart111
intestine159
kidney151
larynx213
liver63
lung203
lymph158
lymph node111
mammary gland132
mouth90
muscle169
nerve64
ovary108
pancreas149
parathyroid97
pharynx73
pituitary gland60
placenta81
prostate73
salivary gland592
skin355
spleen37
stomach31
testis62
thymus112
thyroid64
trachea38
uterus137
vascular174
Health State
TissuesTPM*
normal85
adrenal tumor316
bladder carcinoma56
breast (mammary gland) tumor182
cervical tumor86
chondrosarcoma217
colorectal tumor204
gastrointestinal tumor50
germ cell tumor220
glioma279
head and neck tumor201
kidney tumor261
leukemia95
liver tumor93
lung tumor311
lymphoma96
non-neoplasia82
ovarian tumor118
pancreatic tumor209
primitive neuroectodermal tumor of the CNS275
prostate cancer57
retinoblastoma43
skin tumor518
soft tissue/muscle tissue tumor215
uterine tumor110
Developmental Stage
TissuesTPM*
adult108
embryoid body142
blastocyst195
neonate96
fetus105
infant85
juvenile143
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue33.1
adrenal gland27.6
appendix43.7
bone marrow38.5
cerebral cortex38.8
colon41.1
duodenum32
esophagus39.2
gallbladder28.2
heart muscle29.8
kidney31.6
liver8.2
lung29.6
lymph node36.4
ovary19.1
pancreas24.6
placenta35.2
prostate30.2
salivary gland31.7
skin30.6
small intestine31.3
spleen29.4
stomach35.9
testis37.2
thyroid gland35.1
urinary bladder32.9
Tissues
TissuesExpression level
adrenal glandHigh
appendixMedium
bone marrowMedium
breastMedium
bronchusMedium
cerebellumMedium
cerebral cortexMedium
cervix, uterineMedium
colonMedium
duodenumHigh
endometrium 1High
endometrium 2High
epididymisMedium
esophagusMedium
fallopian tubeMedium
gallbladderMedium
heart muscleMedium
hippocampusMedium
kidneyHigh
lateral ventricleMedium
liverMedium
lungMedium
lymph nodeMedium
nasopharynxMedium
oral mucosaMedium
ovaryMedium
pancreasMedium
parathyroid glandMedium
placentaMedium
prostateMedium
rectumMedium
salivary glandMedium
seminal vesicleMedium
skeletal muscleMedium
skin 1Medium
skin 2Medium
small intestineMedium
smooth muscleMedium
soft tissue 1Low
soft tissue 2Low
spleenMedium
stomach 1Medium
stomach 2Medium
testisHigh
thyroid glandMedium
tonsilMedium
urinary bladderMedium
vaginaMedium
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*606209, gene) Ykt6, s. cerevisiae, homolog of; YKT6OMIM


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