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> Protein (NX_O15535)
Protein (NX_O15535)
Protein
Gene SymbolZSCAN9 to neXtProt (NX_O15535)
DescriptionZinc finger and SCAN domain-containing protein 9
Chromosome6
Location6p22.1 (28192664 ~ 28201260) to Ensembl
Sequene Features : Isoforms 2, Variants 15, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.transcription, DNA-templated .metal ion binding
.sequence-specific DNA binding transcription factor activity
.DNA binding
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 15 0
2014-09-19protein level
2 30 0
2014-05-27transcript level
2 30 0
2014-02-25transcript level
2 30 0
2013-12-09transcript level
2 23 0
2013-11-01transcript level
2 23 0
2013-09-12transcript level
2 23 0
2013-08-17transcript level
2 23 0
2013-07-15transcript level
2 14 0
2013-06-11transcript level
2 14 0
2013-02-12transcript level
2 9 0
2012-12-20transcript level
2 9 0
2012-10-30transcript level
1 10 0
2012-10-07transcript level
1 10 0
2012-08-24transcript level
1 9 0
2012-07-28transcript level
1 9 0
2012-06-08transcript level
1 9 0
2012-05-07transcript level
1 9 0
2012-04-10transcript level
1 9 0
2012-01-13transcript level
1 7 0
2011-12-20transcript level
1 7 0
2011-11-11transcript level
1 7 0
2011-08-23transcript level
1 7 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_O15535-1
1 17 2 45924.7133
NX_O15535-2
3 17 2 51616.9071
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-751531,EBI-593303 SRPK2  
  .regulation of mRNA splicing, via spliceosome
.positive regulation of cell cycle
.innate immune response
  + 12 more...
.14-3-3 protein binding
.poly(A) RNA binding
.ATP binding
  + 2 more...
.cytoplasm
.nucleolus
.nucleoplasm
.nucleus
2 EBI-751531,EBI-473834 MAGEH1  
  .apoptotic process .N/A .cytoplasm
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue77
blood8
bone55
bone marrow41
brain13
connective tissue6
embryonic tissue18
eye23
heart11
intestine21
kidney4
liver4
lung5
lymph node11
mammary gland19
muscle9
nerve64
ovary9
pancreas4
pharynx24
prostate5
skin9
stomach52
testis4
trachea19
vascular19
Health State
TissuesTPM*
normal18
breast (mammary gland) tumor10
chondrosarcoma60
colorectal tumor35
gastrointestinal tumor50
germ cell tumor18
glioma27
head and neck tumor7
leukemia10
primitive neuroectodermal tumor of the CNS47
retinoblastoma43
skin tumor15
uterine tumor44
Developmental Stage
TissuesTPM*
adult20
blastocyst16
neonate32
fetus23
juvenile17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue5.8
adrenal gland8.2
appendix8.4
bone marrow6.7
cerebral cortex6.3
colon7.9
duodenum7.7
esophagus5.8
gallbladder8.9
heart muscle6.7
kidney6
liver2.9
lung9.5
lymph node7.5
ovary10.4
pancreas3.1
placenta8.4
prostate9.4
salivary gland5.7
skin4.4
small intestine7.9
spleen9
stomach7
testis16.4
thyroid gland8.3
urinary bladder9.5
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*602246, gene) Zinc finger protein 193; ZNF193OMIM


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