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> Protein (NX_O43325)
Protein (NX_O43325)
Protein
Gene SymbolLYRM1 to neXtProt (NX_O43325)
DescriptionLYR motif-containing protein 1
Chromosome16
Location16p12.3 (20911190 ~ 20936328) to Ensembl
Sequene Features : Isoforms 1, Variants 16, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .intercellular bridge
.mitochondrion
.nucleoplasm
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 16 0
2014-09-19protein level
1 13 0
2014-05-27protein level
1 13 0
2014-02-25protein level
1 13 0
2013-12-09protein level
1 8 0
2013-11-01protein level
1 8 0
2013-09-12protein level
1 8 0
2013-08-17protein level
1 8 0
2013-07-15transcript level
1 7 0
2013-06-11transcript level
1 7 0
2013-02-12transcript level
1 7 0
2012-12-20transcript level
1 7 0
2012-10-30transcript level
1 8 0
2012-10-07transcript level
1 8 0
2012-08-24transcript level
1 8 0
2012-07-28transcript level
1 8 0
2012-06-08transcript level
1 8 0
2012-05-07transcript level
1 8 0
2012-04-10transcript level
1 8 0
2012-01-13transcript level
1 4 0
2011-12-20transcript level
1 4 0
2011-11-11transcript level
1 4 0
2011-08-23transcript level
1 4 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_O43325-1
8 0 0 14272.6128
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland91
ascites25
blood8
bone27
bone marrow41
brain42
cervix20
connective tissue120
embryonic tissue18
eye86
intestine47
kidney33
larynx42
liver38
lung23
lymph node66
mammary gland26
mouth15
muscle28
ovary9
pancreas18
parathyroid145
pharynx73
pituitary gland60
placenta10
prostate42
salivary gland49
skin33
spleen18
testis41
thymus25
thyroid42
uterus4
vascular58
Health State
TissuesTPM*
normal35
adrenal tumor237
breast (mammary gland) tumor32
cervical tumor28
chondrosarcoma12
colorectal tumor62
gastrointestinal tumor50
germ cell tumor30
glioma65
head and neck tumor22
kidney tumor29
leukemia10
liver tumor20
lung tumor9
non-neoplasia62
pancreatic tumor9
primitive neuroectodermal tumor of the CNS47
prostate cancer9
retinoblastoma172
skin tumor7
soft tissue/muscle tissue tumor135
Developmental Stage
TissuesTPM*
adult36
embryoid body14
blastocyst32
fetus52
juvenile17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue37.9
adrenal gland26.3
appendix18.6
bone marrow15.6
cerebral cortex18.7
colon24.6
duodenum15.6
esophagus21.4
gallbladder22.3
heart muscle29.9
kidney44.2
liver53.6
lung19
lymph node28.3
ovary37.7
pancreas9.8
placenta14.9
prostate30.9
salivary gland14.2
skin12.2
small intestine16.7
spleen16.3
stomach19.2
testis33.1
thyroid gland29.3
urinary bladder25.7
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Disease
No.Disease DescriptionRef.
1(*614709, gene) Lyr motif-containing protein 1; LYRM1OMIM


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