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> Protein (NX_O43556)
Protein (NX_O43556)
Protein
Gene SymbolSGCE to neXtProt (NX_O43556)
DescriptionEpsilon-sarcoglycan
Chromosome7
Location7q21.3 (94214542 ~ 94285521) to Ensembl
Sequene Features : Isoforms 3, Variants 65, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.muscle organ development
.cell-matrix adhesion
.calcium ion binding .sarcolemma
.dendrite membrane
.dendrite
  + 6 more...
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
3 65 1
2014-09-19protein level
3 52 1
2014-05-27protein level
3 52 1
2014-02-25protein level
2 50 1
2013-12-09protein level
2 41 1
2013-11-01protein level
2 41 1
2013-09-12protein level
2 41 1
2013-08-17protein level
2 41 1
2013-07-15protein level
2 31 1
2013-06-11protein level
2 31 1
2013-02-12protein level
2 19 2
2012-12-20protein level
1 20 1
2012-10-30protein level
1 21 1
2012-10-07protein level
1 21 1
2012-08-24protein level
1 19 1
2012-07-28protein level
1 19 1
2012-06-08protein level
1 20 1
2012-05-07protein level
1 20 1
2012-04-10protein level
1 20 1
2012-01-13protein level
1 20 1
2011-12-20protein level
1 8 1
2011-11-11protein level
1 8 1
2011-08-23protein level
1 8 1
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_O43556-1
1 17 0 49818.9768
NX_O43556-3
3 16 0 51380.8186
NX_O43556-4
2 17 0 52491.3193
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue77
adrenal gland91
bladder33
bone13
brain43
connective tissue127
embryonic tissue18
eye52
heart44
intestine17
kidney37
liver29
lung50
lymph node22
muscle37
nerve128
ovary19
pancreas23
pituitary gland60
placenta52
prostate5
salivary gland49
skin18
stomach41
testis22
thymus25
uterus17
vascular135
Health State
TissuesTPM*
normal37
bladder carcinoma113
chondrosarcoma12
colorectal tumor17
gastrointestinal tumor25
germ cell tumor3
glioma9
kidney tumor29
liver tumor62
lymphoma13
non-neoplasia62
ovarian tumor13
pancreatic tumor19
primitive neuroectodermal tumor of the CNS70
prostate cancer9
soft tissue/muscle tissue tumor151
uterine tumor33
Developmental Stage
TissuesTPM*
adult44
embryoid body28
blastocyst32
fetus37
infant42
juvenile71
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue38.7
adrenal gland78.6
appendix13.7
cerebral cortex30
colon16.9
duodenum9
esophagus18.9
gallbladder41.4
heart muscle29.3
kidney21.8
liver6.5
lung34.6
lymph node20.1
ovary98.9
pancreas12
placenta52.8
prostate20.3
salivary gland17.7
skin4.5
small intestine13.8
spleen28.6
stomach13.2
testis29.4
thyroid gland29.6
urinary bladder27.8
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Disease
No.Disease DescriptionRef.
1(#159900, phenotype) Myoclonic dystoniaOMIM
2(*604149, gene) Sarcoglycan, epsilon; SGCEOMIM


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