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> Protein (NX_O43761)
Protein (NX_O43761)
Protein
Gene SymbolSYNGR3 to neXtProt (NX_O43761)
DescriptionSynaptogyrin-3
Chromosome16
Location16p13.3 (2039661 ~ 2044276) to Ensembl
Sequene Features : Isoforms 1, Variants 13, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.positive regulation of transporter activity
.substantia nigra development
.N/A .neuromuscular junction
.synaptic vesicle membrane
.cell junction
  + 2 more...
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 13 1
2014-09-19protein level
1 9 1
2014-05-27protein level
1 9 1
2014-02-25protein level
1 9 1
2013-12-09protein level
1 7 1
2013-11-01protein level
1 7 1
2013-09-12protein level
1 7 0
2013-08-17protein level
1 7 0
2013-07-15protein level
1 5 0
2013-06-11protein level
1 5 0
2013-02-12protein level
1 1 0
2012-12-20protein level
1 1 0
2012-10-30protein level
1 1 0
2012-10-07protein level
1 1 0
2012-08-24protein level
1 1 0
2012-07-28protein level
1 1 0
2012-06-08protein level
1 1 0
2012-05-07protein level
1 1 0
2012-04-10protein level
1 1 0
2012-01-13protein level
1 1 0
2011-12-20protein level
1 1 0
2011-11-11protein level
1 1 0
2011-08-23transcript level
1 1 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_O43761-1
10 0 0 24539.3537
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
brain79
embryonic tissue9
eye38
kidney18
lung8
lymph22
lymph node22
nerve450
pancreas4
placenta28
testis11
thyroid21
tonsil117
Health State
TissuesTPM*
normal28
gastrointestinal tumor16
germ cell tumor15
kidney tumor58
lymphoma41
non-neoplasia51
primitive neuroectodermal tumor of the CNS70
Developmental Stage
TissuesTPM*
adult18
blastocyst16
fetus46
infant42
juvenile161
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adrenal gland7.5
appendix2.4
cerebral cortex35.3
lymph node2.3
placenta2.2
small intestine1.2
testis3.7
Tissues
TissuesExpression level
adrenal glandLow
cerebellumMedium
cerebral cortexMedium
colonHigh
duodenumMedium
endometrium 1Low
epididymisLow
gallbladderLow
heart muscleLow
kidneyLow
liverLow
parathyroid glandLow
placentaLow
rectumLow
skin 1Low
small intestineMedium
smooth muscleLow
stomach 1Medium
stomach 2Medium
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*603927, gene) Synaptogyrin 3; SYNGR3OMIM


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