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> Protein (NX_O75309)
Protein (NX_O75309)
Protein
Gene SymbolCDH16 to neXtProt (NX_O75309)
DescriptionCadherin-16
Chromosome16
Location16q22.1 (66942025 ~ 66952887) to Ensembl
Sequene Features : Isoforms 4, Variants 142, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
.homophilic cell adhesion via plasma membrane adhesion molecules
.cell adhesion
.calcium ion binding .extracellular exosome
.basolateral plasma membrane
.integral component of membrane
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
4 142 3
2014-09-19protein level
4 105 3
2014-05-27protein level
4 105 3
2014-02-25protein level
4 106 3
2013-12-09protein level
4 83 3
2013-11-01protein level
4 77 3
2013-09-12protein level
4 77 3
2013-08-17protein level
4 77 3
2013-07-15protein level
4 58 3
2013-06-11protein level
4 58 3
2013-02-12protein level
2 30 6
2012-12-20protein level
2 29 6
2012-10-30protein level
2 31 6
2012-10-07protein level
2 31 3
2012-08-24protein level
2 20 3
2012-07-28protein level
2 20 3
2012-06-08protein level
2 20 3
2012-05-07protein level
2 19 3
2012-04-10protein level
2 19 3
2012-01-13protein level
2 12 3
2011-12-20protein level
2 12 3
2011-11-11protein level
2 12 3
2011-08-23protein level
2 12 3
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_O75309-1
0 36 0 89866.3714
NX_O75309-2
1 33 0 87559.1042
NX_O75309-3
1 28 0 79145.8982
NX_O75309-4
1 32 0 85720.1382
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
brain7
kidney341
muscle9
placenta3
testis2
thyroid150
Health State
TissuesTPM*
normal21
kidney tumor116
Developmental Stage
TissuesTPM*
adult7
fetus5
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
duodenum1.5
esophagus2.3
kidney238.1
thyroid gland30.4
Tissues
TissuesExpression level
kidneyHigh
thyroid glandHigh
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*603118, gene) Cadherin 16; CDH16OMIM


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