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> Protein (NX_O75323)
Protein (NX_O75323)
Protein
Gene SymbolGBAS to neXtProt (NX_O75323)
DescriptionProtein NipSnap homolog 2
Chromosome7
Location7p11.2 (56019486 ~ 56067874) to Ensembl
Sequene Features : Isoforms 2, Variants 35, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.negative regulation of ATP citrate synthase activity
.ATP biosynthetic process
.oxidative phosphorylation
.N/A .membrane
.integral component of plasma membrane
.mitochondrion
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 35 1
2014-09-19protein level
2 26 1
2014-05-27protein level
2 24 1
2014-02-25protein level
2 24 1
2013-12-09protein level
2 20 1
2013-11-01protein level
2 20 0
2013-09-12protein level
2 20 0
2013-08-17protein level
2 20 0
2013-07-15protein level
2 15 0
2013-06-11protein level
2 15 0
2013-02-12protein level
2 8 1
2012-12-20protein level
2 8 1
2012-10-30protein level
1 8 1
2012-10-07protein level
1 8 1
2012-08-24protein level
1 8 1
2012-07-28protein level
1 8 1
2012-06-08protein level
1 9 1
2012-05-07protein level
1 6 1
2012-04-10protein level
1 6 1
2012-01-13protein level
1 6 1
2011-12-20protein level
1 6 1
2011-11-11protein level
1 6 1
2011-08-23protein level
1 6 1
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_O75323-1
4 9 0 33721.1204
NX_O75323-2
1 9 0 29034.0411
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-307133,EBI-712001 GABARAP  
  .membrane fusion
.nucleophagy
.extrinsic apoptotic signaling pathway via death domain receptors
  + 5 more...
.GABA receptor binding
.beta-tubulin binding
.microtubule binding
.perinuclear region of cytoplasm
.cell body
.cytoplasmic vesicle
  + 13 more...
2 EBI-307133,EBI-720116 GABARAPL2  
  .negative regulation of proteasomal protein catabolic process
.membrane fusion
.nucleophagy
  + 7 more...
.ATPase binding
.GABA receptor binding
.beta-tubulin binding
  + 2 more...
.cytoplasmic vesicle
.extrinsic component of membrane
.cytosol
  + 7 more...
3 EBI-307133,EBI-2603996 MAP1LC3C  
  .membrane fusion
.nucleophagy
.cellular response to nitrogen starvation
  + 2 more...
.microtubule binding .cytoplasmic vesicle
.organelle membrane
.extrinsic component of membrane
  + 6 more...
4 EBI-307133,EBI-373144 MAP1LC3B  
  .regulation of mitochondrion degradation
.membrane fusion
.nucleophagy
  + 3 more...
.microtubule binding .cytoplasmic vesicle
.organelle membrane
.extrinsic component of membrane
  + 9 more...
5 EBI-307133,EBI-746969 GABARAPL1  
  .membrane fusion
.nucleophagy
.mitochondrion degradation
.autophagic vacuole assembly
.GABA receptor binding
.beta-tubulin binding
.Tat protein binding
.microtubule binding
.cell body
.dendrite cytoplasm
.dendrite membrane
  + 10 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland30
ascites150
bladder200
blood81
bone69
bone marrow184
brain88
cervix20
connective tissue67
ear124
embryonic tissue42
esophagus99
eye43
heart402
intestine43
kidney104
liver29
lung62
lymph node122
mammary gland79
mouth15
muscle282
ovary59
pancreas37
parathyroid97
pharynx270
placenta31
prostate221
salivary gland49
skin42
spleen37
stomach94
testis50
thymus37
thyroid128
uterus77
vascular116
Health State
TissuesTPM*
normal76
adrenal tumor79
bladder carcinoma113
breast (mammary gland) tumor53
cervical tumor28
chondrosarcoma108
colorectal tumor35
esophageal tumor115
gastrointestinal tumor92
germ cell tumor60
glioma18
head and neck tumor134
kidney tumor101
leukemia105
liver tumor41
lung tumor38
lymphoma41
non-neoplasia51
ovarian tumor65
pancreatic tumor28
primitive neuroectodermal tumor of the CNS70
prostate cancer298
retinoblastoma21
skin tumor47
soft tissue/muscle tissue tumor87
uterine tumor77
Developmental Stage
TissuesTPM*
adult75
embryoid body28
blastocyst65
neonate32
fetus84
juvenile71
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue49.3
adrenal gland78
appendix28.2
bone marrow27.6
cerebral cortex42.1
colon47.5
duodenum32.8
esophagus53.3
gallbladder31.9
heart muscle198.6
kidney46.9
liver7.2
lung36.9
lymph node27.3
ovary34.5
pancreas25.4
placenta26.7
prostate54.2
salivary gland59.8
skin18.4
small intestine32.5
spleen25.1
stomach39.8
testis25.3
thyroid gland94.8
urinary bladder49.7
Tissues
TissuesExpression level
adrenal glandHigh
appendixHigh
bone marrowLow
breastHigh
bronchusHigh
cerebellumMedium
cerebral cortexMedium
cervix, uterineMedium
colonHigh
duodenumHigh
endometrium 1High
endometrium 2High
epididymisMedium
esophagusHigh
fallopian tubeHigh
gallbladderHigh
heart muscleHigh
hippocampusHigh
kidneyHigh
lateral ventricleMedium
lungMedium
lymph nodeMedium
nasopharynxHigh
oral mucosaMedium
ovaryMedium
pancreasHigh
parathyroid glandHigh
placentaMedium
prostateHigh
rectumHigh
salivary glandHigh
seminal vesicleHigh
skeletal muscleHigh
skin 1Medium
skin 2Medium
small intestineHigh
smooth muscleMedium
soft tissue 1Low
soft tissue 2Medium
spleenHigh
stomach 1High
stomach 2High
testisHigh
thyroid glandHigh
tonsilHigh
urinary bladderHigh
vaginaMedium
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*603004, gene) Glioblastoma amplified sequence; GBASOMIM


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