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> Protein (NX_O75324)
Protein (NX_O75324)
Protein
Gene SymbolSNN to neXtProt (NX_O75324)
DescriptionStannin
Chromosome16
Location16p13.13 (11762270 ~ 11773015) to Ensembl
Sequene Features : Isoforms 1, Variants 13, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.response to abiotic stimulus
.response to stress
.N/A .integral component of membrane
.mitochondrial outer membrane
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 13 1
2014-09-19protein level
1 10 1
2014-05-27protein level
1 10 1
2014-02-25protein level
1 10 1
2013-12-09protein level
1 10 1
2013-11-01protein level
1 9 1
2013-09-12protein level
1 9 1
2013-08-17protein level
1 9 1
2013-07-15protein level
1 4 1
2013-06-11protein level
1 4 1
2013-02-12protein level
1 3 1
2012-12-20protein level
1 3 1
2012-10-30protein level
1 3 1
2012-10-07protein level
1 3 1
2012-08-24protein level
1 3 1
2012-07-28protein level
1 3 1
2012-06-08protein level
1 3 1
2012-05-07protein level
1 3 1
2012-04-10protein level
1 3 1
2012-01-13protein level
1 2 1
2011-12-20protein level
1 2 1
2011-11-11protein level
1 2 1
2011-08-23protein level
1 2 1
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_O75324-1
4 0 0 9490.8708
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland60
bladder66
blood32
bone13
bone marrow41
brain123
connective tissue20
ear124
embryonic tissue32
eye62
heart33
intestine30
kidney28
larynx42
liver4
lung62
lymph node11
mammary gland52
mouth15
muscle37
nerve64
ovary29
pancreas23
pituitary gland60
prostate68
salivary gland148
skin23
spleen18
stomach31
testis48
thymus50
tonsil58
umbilical cord145
uterus30
vascular19
Health State
TissuesTPM*
normal56
adrenal tumor79
breast (mammary gland) tumor10
chondrosarcoma24
colorectal tumor53
gastrointestinal tumor25
germ cell tumor64
glioma139
head and neck tumor37
kidney tumor29
leukemia21
liver tumor10
lung tumor48
non-neoplasia41
ovarian tumor39
pancreatic tumor38
primitive neuroectodermal tumor of the CNS7
prostate cancer96
retinoblastoma21
skin tumor7
soft tissue/muscle tissue tumor31
uterine tumor33
Developmental Stage
TissuesTPM*
adult63
embryoid body28
blastocyst48
neonate96
fetus68
juvenile17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue44.1
adrenal gland27.2
appendix18.3
bone marrow14.2
cerebral cortex75.8
colon6.4
duodenum7.6
esophagus17.5
gallbladder22.7
heart muscle18.9
kidney13.4
liver5
lung17.4
lymph node27.7
ovary15.6
pancreas3.9
placenta6.9
prostate13.8
salivary gland13.2
skin6.9
small intestine7.1
spleen30.4
stomach7.9
testis5.4
thyroid gland17.3
urinary bladder18.6
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*603032, gene) Stannin; SNNOMIM


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