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> Protein (NX_O95210)
Protein (NX_O95210)
Protein
Gene SymbolSTBD1 to neXtProt (NX_O95210)
DescriptionStarch-binding domain-containing protein 1
Chromosome4
Location4q21.1 (77172886 ~ 77232752) to Ensembl
Sequene Features : Isoforms 1, Variants 46, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.muscle contraction .starch binding .membrane
.integral component of plasma membrane
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 46 4
2014-09-19protein level
1 36 4
2014-05-27protein level
1 36 4
2014-02-25protein level
1 36 4
2013-12-09protein level
1 26 4
2013-11-01protein level
1 26 4
2013-09-12protein level
1 26 6
2013-08-17protein level
1 26 6
2013-07-15protein level
1 21 6
2013-06-11protein level
1 21 6
2013-02-12protein level
1 13 4
2012-12-20protein level
1 14 4
2012-10-30protein level
1 16 4
2012-10-07protein level
1 16 4
2012-08-24protein level
1 16 4
2012-07-28protein level
1 16 4
2012-06-08protein level
1 16 4
2012-05-07protein level
1 13 4
2012-04-10protein level
1 13 4
2012-01-13protein level
1 9 4
2011-12-20protein level
1 9 4
2011-11-11protein level
1 9 4
2011-08-23protein level
1 9 4
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_O95210-1
19 0 0 38982.9297
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-2947137,EBI-712001 GABARAP  
  .membrane fusion
.nucleophagy
.extrinsic apoptotic signaling pathway via death domain receptors
  + 5 more...
.GABA receptor binding
.beta-tubulin binding
.microtubule binding
.perinuclear region of cytoplasm
.cell body
.cytoplasmic vesicle
  + 13 more...
2 EBI-2947137,EBI-720116 GABARAPL2  
  .negative regulation of proteasomal protein catabolic process
.membrane fusion
.nucleophagy
  + 7 more...
.ATPase binding
.GABA receptor binding
.beta-tubulin binding
  + 2 more...
.cytoplasmic vesicle
.extrinsic component of membrane
.cytosol
  + 7 more...
3 EBI-2947137,EBI-749265 CCDC155  
  .chromosome localization to nuclear envelope involved in homologous chromosome segregation
.oogenesis
.spermatogenesis
  + 2 more...
.N/A .integral component of membrane
.nuclear outer membrane
.lateral element
.chromosome, telomeric region
4 EBI-2947137,EBI-373144 MAP1LC3B  
  .regulation of mitochondrion degradation
.membrane fusion
.nucleophagy
  + 3 more...
.microtubule binding .cytoplasmic vesicle
.organelle membrane
.extrinsic component of membrane
  + 9 more...
5 EBI-2947137,EBI-746969 GABARAPL1  
  .membrane fusion
.nucleophagy
.mitochondrion degradation
.autophagic vacuole assembly
.GABA receptor binding
.beta-tubulin binding
.Tat protein binding
.microtubule binding
.cell body
.dendrite cytoplasm
.dendrite membrane
  + 10 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue155
ascites25
bladder66
blood40
bone41
bone marrow20
brain11
cervix41
connective tissue26
eye9
heart145
intestine34
kidney52
liver38
lung20
mammary gland52
mouth105
muscle84
nerve64
ovary19
pancreas28
parathyroid48
placenta35
prostate5
skin28
testis16
thyroid42
umbilical cord290
uterus38
Health State
TissuesTPM*
normal34
breast (mammary gland) tumor10
chondrosarcoma36
colorectal tumor26
gastrointestinal tumor8
germ cell tumor15
glioma27
head and neck tumor14
kidney tumor29
leukemia52
liver tumor62
lung tumor9
non-neoplasia41
ovarian tumor26
pancreatic tumor9
primitive neuroectodermal tumor of the CNS7
uterine tumor22
Developmental Stage
TissuesTPM*
adult34
neonate160
fetus35
juvenile17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue33.9
adrenal gland1.8
appendix3
bone marrow3.9
cerebral cortex1.8
colon8.4
duodenum3.2
esophagus4.8
gallbladder3.6
heart muscle11.4
kidney2.4
liver16.2
lung4.4
ovary2.9
pancreas2
placenta4.3
prostate7.3
salivary gland1.1
small intestine8
spleen1.1
stomach6.3
testis3.2
urinary bladder4.1
Tissues
TissuesExpression level
adrenal glandLow
appendixLow
cerebral cortexMedium
colonMedium
duodenumLow
epididymisLow
fallopian tubeLow
gallbladderLow
heart muscleMedium
hippocampusLow
lateral ventricleLow
liverMedium
placentaMedium
prostateLow
rectumLow
seminal vesicleLow
skeletal muscleMedium
small intestineLow
stomach 2Low
testisMedium
urinary bladderMedium
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*607406, gene) Starch-binding domain-containing protein 1; STBD1OMIM


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