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> Protein (NX_O95260)
Protein (NX_O95260)
Protein
Gene SymbolATE1 to neXtProt (NX_O95260)
DescriptionArginyl-tRNA--protein transferase 1
Chromosome10
Location10q26.13 (123499939 ~ 123688316) to Ensembl
Sequene Features : Isoforms 2, Variants 57, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.protein arginylation .arginyltransferase activity .cytoplasm
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 57 1
2014-09-19protein level
2 44 1
2014-05-27protein level
2 44 1
2014-02-25protein level
2 44 1
2013-12-09protein level
2 28 1
2013-11-01protein level
2 27 1
2013-09-12protein level
2 27 1
2013-08-17protein level
2 27 1
2013-07-15protein level
2 16 1
2013-06-11protein level
2 16 1
2013-02-12protein level
2 6 2
2012-12-20protein level
2 6 2
2012-10-30protein level
2 10 2
2012-10-07protein level
2 10 1
2012-08-24protein level
2 10 1
2012-07-28protein level
2 10 1
2012-06-08protein level
2 11 1
2012-05-07protein level
2 11 1
2012-04-10protein level
2 11 1
2012-01-13protein level
2 2 1
2011-12-20protein level
2 2 1
2011-11-11protein level
2 2 1
2011-08-23protein level
2 2 1
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_O95260-1
3 20 0 59052.0364
NX_O95260-2
3 20 0 58993.8567
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-1043378,EBI-349968 SUV39H1  
  .cellular response to hypoxia
.rhythmic process
.negative regulation of transcription, DNA-templated
  + 15 more...
.protein N-terminus binding
.histone methyltransferase activity (H3-K9 specific)
.histone methyltransferase activity
  + 5 more...
.rDNA heterochromatin
.chromatin silencing complex
.nucleoplasm
  + 5 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
ascites25
blood8
brain30
connective tissue13
embryonic tissue23
eye14
heart33
intestine17
kidney23
lung5
lymph node22
mouth30
muscle18
ovary9
pancreas14
placenta17
skin9
spleen18
stomach10
testis43
thymus100
trachea77
uterus12
vascular38
Health State
TissuesTPM*
normal21
gastrointestinal tumor25
germ cell tumor15
glioma9
head and neck tumor14
kidney tumor14
leukemia42
non-neoplasia10
ovarian tumor26
retinoblastoma21
skin tumor15
soft tissue/muscle tissue tumor23
Developmental Stage
TissuesTPM*
adult11
embryoid body42
blastocyst16
fetus21
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue11.8
adrenal gland15.9
appendix12.3
bone marrow10.3
cerebral cortex15.7
colon22.1
duodenum13.4
esophagus33.7
gallbladder37
heart muscle39.7
kidney22.6
liver13.3
lung14.8
lymph node22.7
ovary16.7
pancreas4
placenta13.7
prostate15.7
salivary gland8.3
skin14.7
small intestine15.8
spleen13.3
stomach11.6
testis23.4
thyroid gland55.7
urinary bladder29.8
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*607103, gene) Arginyltransferase 1; ATE1OMIM


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