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> Protein (NX_O95487)
Protein (NX_O95487)
Protein
Gene SymbolSEC24B to neXtProt (NX_O95487)
DescriptionProtein transport protein Sec24B
Chromosome4
Location4q25 (110354928 ~ 110462052) to Ensembl
Sequene Features : Isoforms 3, Variants 134, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.regulation of cargo loading into COPII-coated vesicle
.regulation of establishment of planar polarity involved in neural tube closure
.pulmonary artery morphogenesis
  + 18 more...
.zinc ion binding
.transporter activity
.perinuclear region of cytoplasm
.COPII vesicle coat
.membrane
  + 4 more...
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
3 134 7
2014-09-19protein level
3 101 7
2014-05-27protein level
3 101 8
2014-02-25protein level
2 100 8
2013-12-09protein level
2 65 9
2013-11-01protein level
2 63 8
2013-09-12protein level
2 63 8
2013-08-17protein level
2 63 7
2013-07-15protein level
2 42 3
2013-06-11protein level
2 42 3
2013-02-12protein level
2 12 8
2012-12-20protein level
2 9 8
2012-10-30protein level
2 22 8
2012-10-07protein level
2 22 4
2012-08-24protein level
2 22 4
2012-07-28protein level
2 22 4
2012-06-08protein level
2 16 4
2012-05-07protein level
2 16 4
2012-04-10protein level
2 16 4
2012-01-13protein level
2 7 4
2011-12-20protein level
2 7 4
2011-11-11protein level
2 7 4
2011-08-23protein level
2 7 4
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_O95487-1
0 42 2 137330.7565
NX_O95487-2
1 41 2 133544.2361
NX_O95487-3
2 40 2 140332.2262
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue233
ascites50
bladder33
blood16
bone41
bone marrow61
brain48
connective tissue60
ear62
embryonic tissue37
eye62
heart22
intestine43
kidney104
larynx85
liver29
lung41
lymph node77
mammary gland66
mouth15
ovary19
pancreas51
pituitary gland121
placenta49
prostate94
skin42
spleen93
stomach10
testis16
thymus37
thyroid107
trachea115
umbilical cord290
uterus30
vascular58
Health State
TissuesTPM*
normal59
breast (mammary gland) tumor53
chondrosarcoma96
colorectal tumor44
gastrointestinal tumor25
germ cell tumor60
glioma18
head and neck tumor52
kidney tumor72
leukemia42
liver tumor31
lung tumor9
lymphoma41
non-neoplasia62
ovarian tumor26
pancreatic tumor9
primitive neuroectodermal tumor of the CNS7
prostate cancer125
retinoblastoma43
skin tumor15
uterine tumor11
Developmental Stage
TissuesTPM*
adult59
embryoid body42
blastocyst48
neonate160
fetus61
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue13.2
adrenal gland14
appendix13.6
bone marrow15.3
cerebral cortex11
colon14.2
duodenum12.9
esophagus17.2
gallbladder15.3
heart muscle12.3
kidney13.1
liver23.7
lung12.8
lymph node13.6
ovary20.8
pancreas8.9
placenta18.6
prostate13.3
salivary gland9.4
skin12.9
small intestine11.8
spleen13.4
stomach12.8
testis12.1
thyroid gland18.7
urinary bladder16.4
Tissues
TissuesExpression level
adrenal glandMedium
appendixHigh
bone marrowMedium
breastMedium
bronchusLow
cerebellumHigh
cerebral cortexMedium
cervix, uterineMedium
colonHigh
duodenumMedium
endometrium 1High
endometrium 2Medium
epididymisLow
esophagusMedium
fallopian tubeMedium
gallbladderMedium
heart muscleMedium
hippocampusLow
kidneyHigh
lateral ventricleLow
lungMedium
lymph nodeMedium
nasopharynxMedium
oral mucosaLow
pancreasMedium
parathyroid glandHigh
placentaLow
prostateLow
rectumMedium
salivary glandMedium
seminal vesicleMedium
skeletal muscleMedium
skin 1Medium
skin 2Medium
small intestineMedium
smooth muscleMedium
soft tissue 1Medium
soft tissue 2High
spleenMedium
stomach 1High
stomach 2Medium
testisMedium
thyroid glandLow
tonsilHigh
urinary bladderMedium
vaginaLow
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*607184, gene) Sec24-related gene family, member b; SEC24BOMIM


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