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> Protein (NX_O95976)
Protein (NX_O95976)
Protein
Gene SymbolIGSF6 to neXtProt (NX_O95976)
DescriptionImmunoglobulin superfamily member 6
Chromosome16
Location16p12.2 (21652609 ~ 21663981) to Ensembl
Sequene Features : Isoforms 1, Variants 31, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.cell surface receptor signaling pathway
.immune response
.transmembrane signaling receptor activity .integral component of plasma membrane
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 31 1
2014-09-19protein level
1 26 1
2014-05-27protein level
1 26 1
2014-02-25protein level
1 26 1
2013-12-09protein level
1 17 1
2013-11-01protein level
1 17 1
2013-09-12protein level
1 17 1
2013-08-17protein level
1 17 1
2013-07-15transcript level
1 13 1
2013-06-11transcript level
1 13 1
2013-02-12transcript level
1 8 1
2012-12-20transcript level
1 7 1
2012-10-30transcript level
1 15 1
2012-10-07transcript level
1 15 1
2012-08-24transcript level
1 15 1
2012-07-28transcript level
1 15 1
2012-06-08transcript level
1 16 1
2012-05-07transcript level
1 16 1
2012-04-10transcript level
1 16 1
2012-01-13transcript level
1 7 1
2011-12-20transcript level
1 7 1
2011-11-11transcript level
1 7 1
2011-08-23transcript level
1 7 1
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_O95976-1
11 0 0 26995.7556
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland30
blood32
bone marrow20
brain3
connective tissue13
embryonic tissue4
esophagus49
kidney4
lung20
mammary gland6
pharynx49
placenta10
uterus8
vascular19
Health State
TissuesTPM*
normal7
adrenal tumor79
esophageal tumor57
soft tissue/muscle tissue tumor7
uterine tumor22
Developmental Stage
TissuesTPM*
adult8
blastocyst16
fetus7
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue5.9
adrenal gland5.5
appendix45.8
bone marrow8.9
cerebral cortex5.1
colon13
duodenum8.2
esophagus2.6
gallbladder14.7
heart muscle2.3
kidney2.2
liver11.2
lung19.9
lymph node41.9
ovary1.4
placenta12.9
prostate2.1
salivary gland2.9
skin1.5
small intestine8.3
spleen61.2
stomach8.9
testis2.2
thyroid gland2.5
urinary bladder20.9
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*606222, gene) Immunoglobulin superfamily, member 6; IGSF6OMIM


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