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> Protein (NX_P06028)
Protein (NX_P06028)
Protein
Gene SymbolGYPB to neXtProt (NX_P06028)
DescriptionGlycophorin-B
Chromosome4
Location4q31.21 (144917257 ~ 145061844) to Ensembl
Sequene Features : Isoforms 2, Variants 25, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .integral component of plasma membrane
.plasma membrane
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 25 3
2014-09-19protein level
2 20 3
2014-05-27protein level
2 20 3
2014-02-25protein level
2 20 3
2013-12-09protein level
2 18 3
2013-11-01protein level
2 18 3
2013-09-12protein level
2 18 3
2013-08-17protein level
1 18 3
2013-07-15protein level
1 15 2
2013-06-11protein level
1 15 2
2013-02-12protein level
1 11 2
2012-12-20protein level
1 9 2
2012-10-30protein level
1 12 2
2012-10-07protein level
1 12 2
2012-08-24protein level
1 11 2
2012-07-28protein level
1 10 2
2012-06-08protein level
1 11 2
2012-05-07protein level
1 11 2
2012-04-10protein level
1 11 2
2012-01-13protein level
1 8 2
2011-12-20protein level
1 8 2
2011-11-11protein level
1 8 2
2011-08-23protein level
1 8 2
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_P06028-1
2 1 0 9775.3946
NX_P06028-2
1 1 0 6347.7377
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-10194756,EBI-741480 UBQLN1  
  .regulation of autophagic vacuole assembly
.positive regulation of ER-associated ubiquitin-dependent protein catabolic process
.regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
  + 8 more...
.identical protein binding
.polyubiquitin binding
.kinase binding
.perinuclear region of cytoplasm
.protein complex
.aggresome
  + 6 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
blood57
bone marrow61
heart22
liver9
lung2
prostate5
salivary gland98
Health State
TissuesTPM*
normal15
leukemia31
Developmental Stage
TissuesTPM*
adult1
fetus75
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
bone marrow69.5
placenta3.9
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Disease
No.Disease DescriptionRef.
1(+111740, gene/phenotype) Blood group--ss locus; SsOMIM


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