Home| Contact Us

HOME SEARCH STATISTICS
> Protein (NX_P08865)
Protein (NX_P08865)
Protein
Gene SymbolRPSA to neXtProt (NX_P08865)
Description40S ribosomal protein SA
Chromosome3
Location3p22.1 (39448180 ~ 39454033) to Ensembl
Sequene Features : Isoforms 1, Variants 19, PTMs 12 to neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.cellular protein metabolic process
.viral transcription
.viral life cycle
  + 13 more...
.poly(A) RNA binding
.ribosome binding
.laminin receptor activity
.structural constituent of ribosome
.extracellular exosome
.90S preribosome
.cytosolic small ribosomal subunit
  + 5 more...
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 19 12
2014-09-19protein level
1 14 12
2014-05-27protein level
1 14 12
2014-02-25protein level
1 14 12
2013-12-09protein level
1 14 12
2013-11-01protein level
1 14 10
2013-09-12protein level
1 14 10
2013-08-17protein level
1 14 10
2013-07-15protein level
1 7 6
2013-06-11protein level
1 7 6
2013-02-12protein level
1 4 6
2012-12-20protein level
1 4 6
2012-10-30protein level
1 7 6
2012-10-07protein level
1 7 6
2012-08-24protein level
1 7 6
2012-07-28protein level
1 7 6
2012-06-08protein level
1 14 6
2012-05-07protein level
1 11 6
2012-04-10protein level
1 11 6
2012-01-13protein level
1 17 6
2011-12-20protein level
1 17 6
2011-11-11protein level
1 17 5
2011-08-23protein level
1 17 5
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_P08865-1
13 0 0 32833.341
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-354112,EBI-356367 KARS  
  .viral process
.diadenosine tetraphosphate biosynthetic process
.gene expression
  + 3 more...
.metal ion binding
.amino acid binding
.ATP binding
  + 2 more...
.aminoacyl-tRNA synthetase multienzyme complex
.microtubule cytoskeleton
.plasma membrane
  + 6 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue466
adrenal gland546
ascites1380
bladder937
blood719
bone2485
bone marrow1025
brain297
cervix2784
connective tissue771
ear62
embryonic tissue1949
esophagus297
eye1565
heart457
intestine1198
kidney588
larynx298
liver1061
lung1415
lymph4469
lymph node991
mammary gland925
mouth377
muscle1259
nerve772
ovary1507
pancreas1086
parathyroid631
pharynx270
pituitary gland302
placenta763
prostate1002
salivary gland1283
skin1271
spleen430
stomach1369
testis427
thymus213
thyroid193
tonsil4465
trachea96
umbilical cord2978
uterus1154
vascular542
Health State
TissuesTPM*
normal540
adrenal tumor1106
bladder carcinoma1762
breast (mammary gland) tumor1289
cervical tumor3624
chondrosarcoma1822
colorectal tumor1964
esophageal tumor347
gastrointestinal tumor1409
germ cell tumor1660
glioma438
head and neck tumor269
kidney tumor1539
leukemia889
liver tumor1468
lung tumor2967
lymphoma3213
non-neoplasia527
ovarian tumor1483
pancreatic tumor1180
primitive neuroectodermal tumor of the CNS976
prostate cancer1203
retinoblastoma3682
skin tumor1332
soft tissue/muscle tissue tumor2275
uterine tumor1187
Developmental Stage
TissuesTPM*
adult797
embryoid body2015
blastocyst2538
neonate1319
fetus402
infant127
juvenile863
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue75.1
adrenal gland112.3
appendix166
bone marrow194
cerebral cortex51.1
colon171
duodenum126.9
esophagus163.9
gallbladder87.3
heart muscle71.3
kidney73.1
liver35.2
lung93.1
lymph node262.1
ovary286.5
pancreas106.6
placenta104.1
prostate96.1
salivary gland139
skin146.3
small intestine111.2
spleen130.3
stomach117.3
testis61.8
thyroid gland114.7
urinary bladder139.6
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*150370, gene) Laminin receptor 1; LAMR1OMIM


#424, YPRC/BPRC, Industry-University Research Center, Yonsei Univ., Seodaemun-gu, Seoul, Korea, 120-749
Tel: +82-2-2123-6626, Fax: +82-2-393-6589
2014-2019 (C) Yonsei Proteome Research Center