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> Protein (NX_P0DI80)
Protein (NX_P0DI80)
Protein
Gene SymbolSMIM6 to neXtProt (NX_P0DI80)
DescriptionSmall integral membrane protein 6
Chromosome17
Location17q25.1 (73642323 ~ 73644057) to Ensembl
Sequene Features : Isoforms 1, Variants 1, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .integral component of membrane
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01predicted
1 1 0
2014-09-19predicted
1 1 0
2014-05-27predicted
1 1 0
2014-02-25predicted
1 1 0
2013-12-09predicted
1 1 0
2013-11-01predicted
1 1 0
2013-09-12predicted
1 1 0
2013-08-17predicted
1 1 0
2013-07-15predicted
1 1 0
2013-06-11predicted
1 1 0
2013-02-12predicted
1 1 0
2012-12-20predicted
1 1 0
2012-10-30predicted
1 1 0
2012-10-07predicted
1 0 0
2012-08-24predicted
1 0 0
2012-07-28predicted
1 0 0
2012-06-08predicted
1 0 0
2012-05-07predicted
1 0 0
2012-04-10predicted
1 0 0
2012-01-13predicted
1 0 0
2011-12-20predicted
1 0 0
2011-11-11predicted
1 0 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_P0DI80-1
1 0 0 7012.5448
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
brain1
eye4
kidney4
pancreas18
parathyroid48
prostate5
testis36
Health State
TissuesTPM*
normal5
Developmental Stage
TissuesTPM*
adult2
fetus3
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
cerebral cortex1.6
colon5.9
duodenum9
gallbladder11.4
kidney11.3
liver2
lung2.7
pancreas2.3
small intestine5.6
stomach28.1
testis11.8
Tissues
TissuesExpression level
adrenal glandLow
appendixMedium
bone marrowMedium
bronchusMedium
cerebellumLow
cerebral cortexMedium
cervix, uterineMedium
colonMedium
duodenumMedium
endometrium 1Medium
endometrium 2Medium
epididymisMedium
esophagusMedium
fallopian tubeMedium
gallbladderMedium
heart muscleLow
hippocampusLow
kidneyMedium
lateral ventricleMedium
lungLow
nasopharynxMedium
oral mucosaMedium
ovaryHigh
pancreasLow
prostateLow
rectumMedium
seminal vesicleLow
skeletal muscleLow
skin 1Low
skin 2Medium
small intestineLow
smooth muscleLow
stomach 1Low
stomach 2Medium
testisHigh
thyroid glandMedium
tonsilMedium
urinary bladderHigh
vaginaMedium
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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