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> Protein (NX_P0DI81)
Protein (NX_P0DI81)
Protein
Gene SymbolTRAPPC2 to neXtProt (NX_P0DI81)
DescriptionTrafficking protein particle complex subunit 2
ChromosomeX
LocationXp22.2 (13730363 ~ 13752754) to Ensembl
Sequene Features : Isoforms 3, Variants 9, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.ER to Golgi vesicle-mediated transport
.regulation of transcription, DNA-templated
.transcription, DNA-templated
.skeletal system development
.ion channel binding
.transcription factor binding
.perinuclear region of cytoplasm
.Golgi apparatus
.endoplasmic reticulum
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
3 9 0
2014-09-19protein level
3 9 0
2014-05-27protein level
3 9 0
2014-02-25protein level
3 9 0
2013-12-09protein level
3 9 0
2013-11-01protein level
3 9 0
2013-09-12protein level
3 9 0
2013-08-17protein level
3 9 0
2013-07-15protein level
3 5 0
2013-06-11protein level
3 5 0
2013-02-12protein level
3 4 0
2012-12-20protein level
3 4 0
2012-10-30protein level
3 4 0
2012-10-07protein level
3 4 0
2012-08-24protein level
3 4 0
2012-07-28protein level
3 4 0
2012-06-08protein level
3 4 0
2012-05-07protein level
3 4 0
2012-04-10protein level
3 4 0
2012-01-13protein level
3 4 0
2011-12-20protein level
3 4 0
2011-11-11protein level
3 4 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_P0DI81-1
0 0 6 16434.0202
NX_P0DI81-2
1 2 1 14266.0641
NX_P0DI81-3
0 2 5 20361.0335
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-5663373,EBI-9027502 KCTD1  
  .protein homooligomerization
.negative regulation of transcription, DNA-templated
.transcription, DNA-templated
.transcription factor binding
.transcription corepressor activity
.nucleus
2 EBI-5663373,EBI-2556746 EPS15L1  
  .negative regulation of epidermal growth factor receptor signaling pathway
.epidermal growth factor receptor signaling pathway
.endocytosis
.calcium ion binding .clathrin coat of coated pit
.membrane
.plasma membrane
.nucleus
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
ascites25
blood8
bone marrow20
brain21
cervix61
embryonic tissue14
eye9
heart33
intestine8
kidney33
liver4
lung5
lymph node44
mammary gland6
mouth15
muscle9
ovary9
pharynx24
placenta7
prostate10
stomach10
testis11
thymus62
thyroid21
uterus4
vascular38
Health State
TissuesTPM*
normal3
breast (mammary gland) tumor10
cervical tumor86
gastrointestinal tumor16
germ cell tumor22
glioma37
head and neck tumor14
kidney tumor14
lung tumor9
lymphoma27
primitive neuroectodermal tumor of the CNS7
prostate cancer9
uterine tumor11
Developmental Stage
TissuesTPM*
adult1
embryoid body14
blastocyst16
fetus12
infant85
juvenile17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue4
adrenal gland5.1
appendix7.6
bone marrow5
cerebral cortex7.6
colon6.3
duodenum5.7
esophagus5.2
gallbladder5.1
heart muscle3.4
kidney6.2
liver4
lung7
lymph node12.4
ovary8.3
pancreas2.6
placenta4.7
prostate6.5
salivary gland4.7
skin6.9
small intestine4.7
spleen9.1
stomach7.6
testis2.8
thyroid gland6.2
urinary bladder5.6
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*300202, gene) Tracking protein particle complex, subunit 2; TRAPPC2OMIM
2(#313400, phenotype) Spondyloepiphyseal dysplasia tarda, x-linked; SEDTOMIM


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