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> Protein (NX_P0DJD3)
Protein (NX_P0DJD3)
Gene SymbolRBMY1A1 to neXtProt (NX_P0DJD3)
DescriptionRNA-binding motif protein, Y chromosome, family 1 member A1
LocationYq11.223 (23673258 ~ 23711212) to Ensembl
Sequene Features : Isoforms 3, Variants 4, PTMsto neXtProt Sequence Features
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.RNA splicing
.mRNA processing
.regulation of alternative mRNA splicing, via spliceosome
.mRNA binding
.nucleotide binding
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
3 4 0
2014-09-19protein level
3 3 0
2014-05-27protein level
3 3 0
2014-02-25protein level
3 3 0
2013-12-09protein level
3 3 0
2013-11-01protein level
3 3 0
2013-09-12protein level
3 3 0
2013-08-17protein level
3 3 0
2013-07-15protein level
3 3 0
2013-06-11protein level
3 3 0
2013-02-12protein level
3 0 0
2012-12-20protein level
3 0 0
2012-10-30protein level
3 0 0
2012-10-07protein level
3 0 0
2012-08-24protein level
3 0 0
2012-07-28protein level
3 0 0
Protein Isoforms
Isoform Ac UGSMw (Da)
0 0 17 55749.4732
0 0 16 51260.4962
0 0 11 40626.6537
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-8638511,EBI-743526 RBMX  
  .cellular response to interleukin-1
.protein homooligomerization
.positive regulation of mRNA splicing, via spliceosome
  + 10 more...
.poly(A) RNA binding
.mRNA binding
.single-stranded RNA binding
  + 4 more...
.catalytic step 2 spliceosome
.extracellular exosome
.supraspliceosomal complex
  + 6 more...
2 EBI-8638511,EBI-745579 CLK3  
  .protein autophosphorylation
.regulation of RNA splicing
.protein phosphorylation
.poly(A) RNA binding
.ATP binding
.protein tyrosine kinase activity
  + 2 more...
.intermediate filament cytoskeleton
.nuclear speck
  + 3 more...
3 EBI-8638511,EBI-2803328 PRR3  
  .N/A .metal ion binding
.poly(A) RNA binding
4 EBI-8638511,EBI-2949699 RBM3  
  .positive regulation of translation
.production of miRNAs involved in gene silencing by miRNA
.response to cold
  + 3 more...
.poly(A) RNA binding
.ribosomal large subunit binding
.RNA binding
.nucleotide binding
5 EBI-8638511,EBI-538850 CIRBP  
  .mRNA stabilization
.positive regulation of translation
.stress granule assembly
  + 3 more...
.small ribosomal subunit rRNA binding
.poly(A) RNA binding
.translation repressor activity
  + 2 more...
.cytoplasmic stress granule
6 EBI-8638511,EBI-745934 CBX2  
  .development of primary sexual characteristics
.cellular protein metabolic process
.post-translational protein modification
  + 5 more...
.chromatin binding
.DNA binding
.PRC1 complex
.PcG protein complex
  + 3 more...
7 EBI-8638511,EBI-739832 LNX1  
  .protein homooligomerization
.protein ubiquitination involved in ubiquitin-dependent protein catabolic process
.ligase activity
.zinc ion binding
.ubiquitin-protein transferase activity
8 EBI-8638511,EBI-8637627 AEN  
  .nucleic acid phosphodiester bond hydrolysis
.intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
.response to ionizing radiation
.exonuclease activity
.nucleic acid binding
.nuclear membrane
9 EBI-8638511,EBI-1210473 ZNF317  
  .regulation of transcription, DNA-templated
.transcription, DNA-templated
.metal ion binding
.sequence-specific DNA binding transcription factor activity
.DNA binding
10 EBI-8638511,EBI-1044593 APOBEC3C  
  .DNA demethylation
.defense response to virus
.innate immune response
  + 4 more...
.poly(A) RNA binding
.hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
.zinc ion binding
11 EBI-8638511,EBI-10329013 PCDHB14  
  .calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
.synapse assembly
.synaptic transmission
.homophilic cell adhesion via plasma membrane adhesion molecules
.calcium ion binding .integral component of membrane
.plasma membrane
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
Health State
Developmental Stage
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
TissuesExpression level
TumorNumber of patients and Staining levels
breast cancer
cervical cancer
colorectal cancer
endometrial cancer
head and neck cancer
liver cancer
lung cancer
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
No.Disease DescriptionRef.
1(*400006, gene) Rna-binding motif protein, y chromosome, family 1, member a1; RBMY1A1OMIM

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