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> Protein (NX_P18621)
Protein (NX_P18621)
Protein
Gene SymbolRPL17 to neXtProt (NX_P18621)
Description60S ribosomal protein L17
Chromosome18
Location18q21.1 (47008051 ~ 47017956) to Ensembl
Sequene Features : Isoforms 3, Variants 18, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.cellular protein metabolic process
.viral transcription
.viral life cycle
  + 8 more...
.poly(A) RNA binding
.structural constituent of ribosome
.cytosolic large ribosomal subunit
.cytosol
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
3 18 9
2014-09-19protein level
3 16 9
2014-05-27protein level
3 16 9
2014-02-25protein level
3 16 9
2013-12-09protein level
3 12 9
2013-11-01protein level
3 12 6
2013-09-12protein level
3 12 6
2013-08-17protein level
3 12 6
2013-07-15protein level
2 3 1
2013-06-11protein level
2 3 1
2013-02-12protein level
1 0 1
2012-12-20protein level
1 0 1
2012-10-30protein level
1 1 1
2012-10-07protein level
1 1 1
2012-08-24protein level
1 1 1
2012-07-28protein level
1 1 1
2012-06-08protein level
1 2 1
2012-05-07protein level
1 2 1
2012-04-10protein level
1 2 1
2012-01-13protein level
1 4 1
2011-12-20protein level
1 4 1
2011-11-11protein level
1 4 1
2011-08-23protein level
1 4 1
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_P18621-1
0 7 0 21383.2692
NX_P18621-2
0 6 0 17083.075
NX_P18621-3
2 7 0 26355.6494
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue233
adrenal gland91
ascites100
bladder100
blood65
bone55
bone marrow266
brain24
cervix164
connective tissue67
ear62
embryonic tissue23
esophagus49
eye52
heart22
intestine12
kidney142
liver97
lung77
lymph22
lymph node11
mammary gland19
muscle47
nerve64
ovary39
pancreas60
pharynx49
pituitary gland181
placenta56
prostate79
salivary gland246
skin23
stomach10
testis50
thyroid21
uterus30
vascular19
Health State
TissuesTPM*
normal114
adrenal tumor237
bladder carcinoma341
breast (mammary gland) tumor236
cervical tumor86
chondrosarcoma193
colorectal tumor311
esophageal tumor173
gastrointestinal tumor109
germ cell tumor117
glioma46
head and neck tumor156
kidney tumor232
leukemia275
liver tumor135
lung tumor739
lymphoma526
non-neoplasia72
ovarian tumor301
pancreatic tumor266
primitive neuroectodermal tumor of the CNS196
prostate cancer520
retinoblastoma129
skin tumor255
soft tissue/muscle tissue tumor287
uterine tumor288
Developmental Stage
TissuesTPM*
adult76
embryoid body114
blastocyst406
neonate418
fetus131
infant42
juvenile71
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue3
adrenal gland4.6
appendix5.3
bone marrow1.8
cerebral cortex3.6
colon4.7
duodenum1.6
esophagus1.6
gallbladder2.5
heart muscle3.1
kidney3.9
liver2.8
lung1.7
lymph node3.2
ovary2.7
pancreas3.5
placenta2
prostate2.7
salivary gland2.3
skin2
small intestine1.8
spleen2.9
stomach2.4
testis4.7
thyroid gland2.6
urinary bladder1.5
Tissues
TissuesExpression level
adrenal glandLow
appendixHigh
bone marrowMedium
breastLow
bronchusMedium
cerebellumHigh
cerebral cortexHigh
cervix, uterineMedium
colonHigh
duodenumHigh
endometrium 1Medium
endometrium 2Medium
epididymisMedium
esophagusHigh
fallopian tubeHigh
gallbladderMedium
heart muscleLow
hippocampusHigh
kidneyLow
lateral ventricleHigh
liverMedium
lungLow
lymph nodeMedium
nasopharynxMedium
oral mucosaMedium
ovaryLow
pancreasHigh
parathyroid glandMedium
placentaMedium
prostateMedium
rectumHigh
salivary glandMedium
seminal vesicleMedium
skin 1Low
skin 2Medium
small intestineHigh
soft tissue 1Medium
soft tissue 2Low
spleenMedium
stomach 1High
stomach 2High
testisMedium
thyroid glandLow
tonsilMedium
urinary bladderMedium
vaginaMedium
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*603661, gene) Ribosomal protein l17; RPL17OMIM


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