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> Protein (NX_P25391)
Protein (NX_P25391)
Protein
Gene SymbolLAMA1 to neXtProt (NX_P25391)
DescriptionLaminin subunit alpha-1
Chromosome18
Location18p11.23 (6941743 ~ 7117813) to Ensembl
Sequene Features : Isoforms 1, Variants 588, PTMs 102 to neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.retinal blood vessel morphogenesis
.branching involved in salivary gland morphogenesis
.epithelial tube branching involved in lung morphogenesis
  + 9 more...
.glycosphingolipid binding
.extracellular matrix structural constituent
.extracellular matrix
.cell-cell junction
.extracellular space
  + 5 more...
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 588 102
2014-09-19protein level
1 450 102
2014-05-27protein level
1 449 102
2014-02-25protein level
1 442 102
2013-12-09protein level
1 360 102
2013-11-01protein level
1 330 102
2013-09-12protein level
1 330 102
2013-08-17protein level
1 330 102
2013-07-15protein level
1 224 102
2013-06-11protein level
1 224 102
2013-02-12protein level
1 136 102
2012-12-20protein level
1 132 102
2012-10-30protein level
1 155 102
2012-10-07protein level
1 155 102
2012-08-24protein level
1 107 102
2012-07-28protein level
1 106 102
2012-06-08protein level
1 119 102
2012-05-07protein level
1 118 102
2012-04-10protein level
1 118 102
2012-01-13protein level
1 62 102
2011-12-20protein level
1 62 102
2011-11-11protein level
1 62 102
2011-08-23protein level
1 62 102
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_P25391-1
141 0 0 336865.8748
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
bladder33
blood8
bone13
brain10
connective tissue40
embryonic tissue56
eye14
intestine17
kidney23
liver9
lung11
mouth15
muscle37
ovary19
pharynx24
placenta10
prostate10
skin28
testis50
thymus12
thyroid107
trachea19
uterus8
Health State
TissuesTPM*
normal16
chondrosarcoma48
colorectal tumor8
germ cell tumor136
head and neck tumor37
kidney tumor14
leukemia10
liver tumor10
lung tumor19
non-neoplasia51
ovarian tumor13
prostate cancer19
skin tumor47
soft tissue/muscle tissue tumor15
Developmental Stage
TissuesTPM*
adult23
embryoid body57
blastocyst65
fetus23
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue1.1
cerebral cortex2.8
colon4.3
duodenum4.8
kidney3.6
ovary2.5
salivary gland1.8
small intestine2.7
testis12.2
thyroid gland4
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*150320, gene) Laminin, alpha-1; LAMA1OMIM


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