Home| Contact Us

HOME SEARCH STATISTICS
> Protein (NX_P26373)
Protein (NX_P26373)
Protein
Gene SymbolRPL13 to neXtProt (NX_P26373)
Description60S ribosomal protein L13
Chromosome16
Location16q24.3 (89627065 ~ 89630950) to Ensembl
Sequene Features : Isoforms 2, Variants 21, PTMs 11 to neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.cellular protein metabolic process
.viral transcription
.viral life cycle
  + 8 more...
.poly(A) RNA binding
.structural constituent of ribosome
.RNA binding
.cytosolic ribosome
.cytosolic large ribosomal subunit
.membrane
  + 4 more...
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 21 11
2014-09-19protein level
2 17 11
2014-05-27protein level
2 17 13
2014-02-25protein level
2 16 12
2013-12-09protein level
2 13 12
2013-11-01protein level
2 13 11
2013-09-12protein level
2 13 11
2013-08-17protein level
2 13 11
2013-07-15protein level
2 10 7
2013-06-11protein level
2 10 7
2013-02-12protein level
1 8 6
2012-12-20protein level
1 8 6
2012-10-30protein level
1 9 6
2012-10-07protein level
1 9 6
2012-08-24protein level
1 9 6
2012-07-28protein level
1 9 6
2012-06-08protein level
1 9 6
2012-05-07protein level
1 6 6
2012-04-10protein level
1 6 6
2012-01-13protein level
1 14 6
2011-12-20protein level
1 14 6
2011-11-11protein level
1 14 6
2011-08-23protein level
1 14 6
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_P26373-1
2 7 0 24246.4511
NX_P26373-2
0 7 0 18833.3506
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-356849,EBI-389883 NCK1  
  .negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
.negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation
.negative regulation of PERK-mediated unfolded protein response
  + 23 more...
.eukaryotic initiation factor eIF2 binding
.receptor tyrosine kinase binding
.protein binding, bridging
  + 5 more...
.vesicle membrane
.cell-cell junction
.plasma membrane
  + 6 more...
2 EBI-356849,EBI-79464 PIK3R1  
  .positive regulation of endoplasmic reticulum unfolded protein response
.positive regulation of establishment of protein localization to plasma membrane
.growth hormone receptor signaling pathway
  + 41 more...
.1-phosphatidylinositol-3-kinase regulator activity
.insulin receptor substrate binding
.insulin binding
  + 9 more...
.membrane
.phosphatidylinositol 3-kinase complex, class IA
.phosphatidylinositol 3-kinase complex
  + 5 more...
3 EBI-356849,EBI-5323863 LRRK2  
  .negative regulation of peroxidase activity
.regulation of synaptic vesicle exocytosis
.regulation of branching morphogenesis of a nerve
  + 64 more...
.protein kinase A binding
.ion channel binding
.protein homodimerization activity
  + 18 more...
.extracellular exosome
.membrane raft
.perikaryon
  + 25 more...
4 EBI-356849,EBI-739624 CEP70  
  .organelle organization
.mitotic cell cycle
.G2/M transition of mitotic cell cycle
.N/A .nuclear membrane
.cytosol
.centrosome
  + 2 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue388
adrenal gland455
ascites1129
bladder267
blood359
bone516
bone marrow636
brain382
cervix1031
connective tissue308
ear62
embryonic tissue1287
esophagus347
eye847
heart256
intestine547
kidney616
larynx170
liver891
lung785
lymph2166
lymph node1559
mammary gland489
mouth483
muscle1034
nerve772
ovary729
pancreas1358
parathyroid194
pharynx491
pituitary gland544
placenta367
prostate1371
salivary gland1529
skin873
spleen692
stomach616
testis202
thymus376
thyroid64
tonsil3466
trachea173
umbilical cord1017
uterus672
vascular212
Health State
TissuesTPM*
normal539
adrenal tumor632
bladder carcinoma511
breast (mammary gland) tumor687
cervical tumor1333
chondrosarcoma253
colorectal tumor622
esophageal tumor405
gastrointestinal tumor776
germ cell tumor577
glioma979
head and neck tumor560
kidney tumor885
leukemia1354
liver tumor1135
lung tumor1868
lymphoma1634
non-neoplasia269
ovarian tumor616
pancreatic tumor914
primitive neuroectodermal tumor of the CNS661
prostate cancer1906
retinoblastoma1399
skin tumor1100
soft tissue/muscle tissue tumor934
uterine tumor787
Developmental Stage
TissuesTPM*
adult543
embryoid body943
blastocyst1041
neonate611
fetus393
juvenile215
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue313.3
adrenal gland321
appendix362.6
bone marrow370.7
cerebral cortex146.2
colon383.4
duodenum343.8
esophagus369.2
gallbladder272.7
heart muscle243.8
kidney243.7
liver163.9
lung291.3
lymph node589.2
ovary839
pancreas357.8
placenta227.8
prostate402.9
salivary gland555.9
skin522.8
small intestine314.3
spleen453.2
stomach397.6
testis153.6
thyroid gland247
urinary bladder344.6
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*113703, gene) Ribosomal protein l13; RPL13OMIM


#424, YPRC/BPRC, Industry-University Research Center, Yonsei Univ., Seodaemun-gu, Seoul, Korea, 120-749
Tel: +82-2-2123-6626, Fax: +82-2-393-6589
2014-2019 (C) Yonsei Proteome Research Center