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> Protein (NX_P78556)
Protein (NX_P78556)
Protein
Gene SymbolCCL20 to neXtProt (NX_P78556)
DescriptionC-C motif chemokine 20
Chromosome2
Location2q36.3 (228678558 ~ 228682272) to Ensembl
Sequene Features : Isoforms 2, Variants 15, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.positive regulation of T cell migration
.cellular response to lipoteichoic acid
.cellular response to lipopolysaccharide
  + 10 more...
.chemokine activity .extracellular space
.extracellular region
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 15 2
2014-09-19protein level
2 12 2
2014-05-27protein level
2 12 2
2014-02-25protein level
2 12 2
2013-12-09protein level
2 10 2
2013-11-01protein level
2 10 2
2013-09-12protein level
2 10 2
2013-08-17protein level
2 10 2
2013-07-15protein level
2 6 2
2013-06-11protein level
2 6 2
2013-02-12protein level
2 2 4
2012-12-20protein level
2 2 4
2012-10-30protein level
2 3 4
2012-10-07protein level
2 3 2
2012-08-24protein level
2 3 2
2012-07-28protein level
2 3 2
2012-06-08protein level
2 3 2
2012-05-07protein level
2 3 2
2012-04-10protein level
2 3 2
2012-01-13protein level
2 2 2
2011-12-20protein level
2 2 2
2011-11-11protein level
2 2 2
2011-08-23protein level
2 2 2
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_P78556-1
1 2 0 10754.5887
NX_P78556-2
1 2 0 10683.5518
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-3913209,EBI-749285 RALBP1  
  .regulation of small GTPase mediated signal transduction
.positive regulation of GTPase activity
.regulation of GTPase activity
  + 5 more...
.Rac GTPase binding
.ATPase activity, coupled to movement of substances
.Ral GTPase binding
  + 2 more...
.membrane
.cytosol
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
blood40
brain2
connective tissue6
esophagus49
eye19
intestine142
kidney4
liver19
lung8
mouth60
pancreas14
pharynx270
stomach62
uterus4
vascular58
Health State
TissuesTPM*
normal13
colorectal tumor222
esophageal tumor57
gastrointestinal tumor33
head and neck tumor29
liver tumor31
uterine tumor11
Developmental Stage
TissuesTPM*
adult23
fetus3
juvenile35
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue5
appendix38.1
bone marrow3.1
colon20.3
duodenum16.8
esophagus2.3
gallbladder176.5
kidney1.4
liver15.2
lung6.8
lymph node6.9
placenta1.8
prostate1.7
skin2.6
small intestine24.2
stomach15
urinary bladder80.5
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Disease
No.Disease DescriptionRef.
1(*601960, gene) Chemokine, cc motif, ligand 20; CCL20OMIM


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