Home| Contact Us

HOME SEARCH STATISTICS
> Protein (NX_P98179)
Protein (NX_P98179)
Protein
Gene SymbolRBM3 to neXtProt (NX_P98179)
DescriptionPutative RNA-binding protein 3
ChromosomeX
LocationXp11.23 (48432837 ~ 48437454) to Ensembl
Sequene Features : Isoforms 1, Variants 14, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.positive regulation of translation
.production of miRNAs involved in gene silencing by miRNA
.response to cold
  + 3 more...
.poly(A) RNA binding
.ribosomal large subunit binding
.RNA binding
.nucleotide binding
.dendrite
.cytoplasm
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 14 9
2014-09-19protein level
1 10 9
2014-05-27protein level
1 10 9
2014-02-25protein level
1 10 4
2013-12-09protein level
1 9 4
2013-11-01protein level
1 8 4
2013-09-12protein level
1 8 5
2013-08-17protein level
1 8 5
2013-07-15protein level
1 5 5
2013-06-11protein level
1 5 5
2013-02-12protein level
1 2 7
2012-12-20protein level
1 2 7
2012-10-30protein level
1 3 7
2012-10-07protein level
1 3 7
2012-08-24protein level
1 3 7
2012-07-28protein level
1 3 7
2012-06-08protein level
1 2 7
2012-05-07protein level
1 2 7
2012-04-10protein level
1 2 7
2012-01-13protein level
1 3 7
2011-12-20protein level
1 3 7
2011-11-11protein level
1 3 7
2011-08-23protein level
1 3 7
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_P98179-1
6 0 0 17159.9389
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-2949699,EBI-607085 SNRPA  
  .gene expression
.RNA splicing
.mRNA splicing, via spliceosome
.poly(A) RNA binding
.snRNA binding
.RNA binding
.nucleotide binding
.cytoplasm
.nucleolus
.U1 snRNP
  + 2 more...
2 EBI-2949699,EBI-8638511 RBMY1A1  
  .RNA splicing
.mRNA processing
.regulation of alternative mRNA splicing, via spliceosome
.mRNA binding
.nucleotide binding
.nucleus
3 EBI-2949699,EBI-743526 RBMX  
  .cellular response to interleukin-1
.protein homooligomerization
.positive regulation of mRNA splicing, via spliceosome
  + 10 more...
.poly(A) RNA binding
.mRNA binding
.single-stranded RNA binding
  + 4 more...
.catalytic step 2 spliceosome
.extracellular exosome
.supraspliceosomal complex
  + 6 more...
4 EBI-2949699,EBI-304185 HNRNPK  
  .regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter
.positive regulation of receptor-mediated endocytosis
.positive regulation of transcription from RNA polymerase II promoter
  + 8 more...
.poly(A) RNA binding
.RNA binding
.single-stranded DNA binding
  + 2 more...
.catalytic step 2 spliceosome
.extracellular exosome
.cell projection
  + 7 more...
5 EBI-2949699,EBI-8642021 RBMY1F  
  .RNA splicing
.spermatogenesis
.mRNA processing
.RNA binding
.nucleotide binding
.nucleus
6 EBI-2949699,EBI-742808 KHDRBS2  
  .regulation of transcription, DNA-templated
.transcription, DNA-templated
.poly(U) RNA binding
.poly(A) binding
.nucleus
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue388
adrenal gland333
ascites376
bladder401
blood212
bone181
bone marrow369
brain158
cervix515
connective tissue60
ear62
embryonic tissue352
esophagus198
eye119
heart212
intestine193
kidney128
liver355
lung170
lymph112
lymph node167
mammary gland92
mouth60
muscle94
ovary88
pancreas131
parathyroid194
pharynx368
pituitary gland60
placenta229
prostate279
salivary gland49
skin213
spleen449
stomach240
testis73
thymus577
thyroid85
trachea96
umbilical cord72
uterus172
vascular271
Health State
TissuesTPM*
normal159
adrenal tumor79
breast (mammary gland) tumor118
cervical tumor695
colorectal tumor106
esophageal tumor231
gastrointestinal tumor320
germ cell tumor250
glioma130
head and neck tumor44
kidney tumor246
leukemia275
liver tumor624
lung tumor194
lymphoma235
non-neoplasia238
ovarian tumor65
pancreatic tumor190
primitive neuroectodermal tumor of the CNS141
prostate cancer337
retinoblastoma107
skin tumor263
soft tissue/muscle tissue tumor63
uterine tumor77
Developmental Stage
TissuesTPM*
adult135
embryoid body371
blastocyst439
neonate96
fetus80
infant382
juvenile377
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue197.3
adrenal gland109.1
appendix201.4
bone marrow257.3
cerebral cortex73
colon175.4
duodenum140.1
esophagus203.6
gallbladder127.2
heart muscle118.1
kidney94.5
liver52.2
lung165.9
lymph node212.8
ovary120.9
pancreas91.8
placenta145
prostate113.6
salivary gland90.4
skin159.8
small intestine126.9
spleen163.8
stomach152.9
testis94.5
thyroid gland136.4
urinary bladder160.8
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*300027, gene) Rna-binding motif protein 3; RBM3OMIM


#424, YPRC/BPRC, Industry-University Research Center, Yonsei Univ., Seodaemun-gu, Seoul, Korea, 120-749
Tel: +82-2-2123-6626, Fax: +82-2-393-6589
2014-2020 (C) Yonsei Proteome Research Center