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> Protein (NX_Q00444)
Protein (NX_Q00444)
Protein
Gene SymbolHOXC5 to neXtProt (NX_Q00444)
DescriptionHomeobox protein Hox-C5
Chromosome12
Location12q13.13 (54426637 ~ 54429142) to Ensembl
Sequene Features : Isoforms 1, Variants 38, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.embryonic skeletal system development
.anterior/posterior pattern specification
.regulation of transcription from RNA polymerase II promoter
.transcription, DNA-templated
.sequence-specific DNA binding
.sequence-specific DNA binding transcription factor activity
.cell junction
.nucleoplasm
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01homology
1 38 0
2014-09-19homology
1 25 0
2014-05-27homology
1 25 1
2014-02-25homology
1 25 1
2013-12-09homology
1 18 1
2013-11-01homology
1 18 0
2013-09-12homology
1 18 0
2013-08-17homology
1 18 0
2013-07-15homology
1 11 0
2013-06-11homology
1 11 0
2013-02-12transcript level
1 6 0
2012-12-20transcript level
1 6 0
2012-10-30transcript level
1 7 0
2012-10-07transcript level
1 7 0
2012-08-24transcript level
1 6 0
2012-07-28transcript level
1 6 0
2012-06-08transcript level
1 6 0
2012-05-07transcript level
1 4 0
2012-04-10transcript level
1 4 0
2012-01-13transcript level
1 3 0
2011-12-20transcript level
1 3 0
2011-11-11transcript level
1 3 0
2011-08-23transcript level
1 3 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q00444-1
9 0 1 24960.2355
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
ascites25
bone27
brain4
connective tissue6
embryonic tissue18
eye9
heart11
intestine25
kidney66
larynx42
lung5
lymph node33
mammary gland19
muscle9
nerve128
ovary68
pancreas18
skin4
stomach20
testis4
uterus21
Health State
TissuesTPM*
normal11
breast (mammary gland) tumor32
chondrosarcoma12
gastrointestinal tumor25
germ cell tumor3
glioma18
head and neck tumor7
kidney tumor29
leukemia42
non-neoplasia10
ovarian tumor91
pancreatic tumor28
primitive neuroectodermal tumor of the CNS47
retinoblastoma43
skin tumor7
soft tissue/muscle tissue tumor7
uterine tumor44
Developmental Stage
TissuesTPM*
adult5
embryoid body42
fetus14
juvenile17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
ovary1.5
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*142973, gene) Homeobox 3d; HOX3DOMIM


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