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> Protein (NX_Q10471)
Protein (NX_Q10471)
Protein
Gene SymbolGALNT2 to neXtProt (NX_Q10471)
DescriptionPolypeptide N-acetylgalactosaminyltransferase 2
Chromosome1
Location1q42.13 (230193536 ~ 230417870) to Ensembl
Sequene Features : Isoforms 2, Variants 82, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.cellular protein metabolic process
.post-translational protein modification
.protein O-linked glycosylation via threonine
  + 4 more...
.carbohydrate binding
.manganese ion binding
.polypeptide N-acetylgalactosaminyltransferase activity
.extracellular exosome
.perinuclear region of cytoplasm
.Golgi cisterna membrane
  + 5 more...
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 82 9
2014-09-19protein level
1 62 9
2014-05-27protein level
1 62 9
2014-02-25protein level
1 63 9
2013-12-09protein level
1 51 7
2013-11-01protein level
1 48 7
2013-09-12protein level
1 48 7
2013-08-17protein level
1 48 7
2013-07-15protein level
1 29 3
2013-06-11protein level
1 29 3
2013-02-12protein level
1 13 3
2012-12-20protein level
1 13 3
2012-10-30protein level
1 14 3
2012-10-07protein level
1 14 3
2012-08-24protein level
1 14 3
2012-07-28protein level
1 14 3
2012-06-08protein level
1 23 3
2012-05-07protein level
1 18 3
2012-04-10protein level
1 18 3
2012-01-13protein level
1 15 3
2011-12-20protein level
1 15 3
2011-11-11protein level
1 15 3
2011-08-23protein level
1 15 3
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q10471-1
18 10 1 64691.2818
NX_Q10471-2
2 10 0 30236.3774
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-10226985,EBI-749265 CCDC155  
  .chromosome localization to nuclear envelope involved in homologous chromosome segregation
.oogenesis
.spermatogenesis
  + 2 more...
.N/A .integral component of membrane
.nuclear outer membrane
.lateral element
.chromosome, telomeric region
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland91
ascites100
bladder66
blood106
bone195
bone marrow20
brain82
cervix185
connective tissue87
ear62
embryonic tissue140
esophagus99
eye119
heart111
intestine90
kidney151
liver151
lung131
lymph22
lymph node22
mammary gland99
mouth332
muscle84
ovary167
pancreas107
parathyroid48
pharynx24
placenta74
prostate168
skin180
spleen37
stomach114
testis176
thymus338
thyroid128
trachea231
uterus60
vascular154
Health State
TissuesTPM*
normal104
adrenal tumor237
bladder carcinoma56
breast (mammary gland) tumor118
cervical tumor202
chondrosarcoma301
colorectal tumor35
esophageal tumor115
gastrointestinal tumor118
germ cell tumor284
glioma121
head and neck tumor179
kidney tumor174
leukemia116
liver tumor104
lung tumor87
lymphoma83
non-neoplasia20
ovarian tumor196
pancreatic tumor171
primitive neuroectodermal tumor of the CNS86
prostate cancer279
retinoblastoma21
skin tumor95
uterine tumor66
Developmental Stage
TissuesTPM*
adult118
embryoid body242
blastocyst65
fetus116
infant85
juvenile161
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue31.2
adrenal gland36.1
appendix37.1
bone marrow21
cerebral cortex18.7
colon24.2
duodenum20.4
esophagus22.4
gallbladder26.9
heart muscle19.7
kidney21.5
liver39.8
lung19
lymph node16
ovary41.8
pancreas36.2
placenta33.7
prostate19
salivary gland13.3
skin15.1
small intestine19.1
spleen16.5
stomach21.5
testis31.7
thyroid gland25.2
urinary bladder33.2
Tissues
TissuesExpression level
adrenal glandMedium
appendixLow
bone marrowLow
breastLow
bronchusMedium
cerebellumMedium
cerebral cortexMedium
cervix, uterineLow
colonMedium
duodenumMedium
endometrium 1Medium
endometrium 2Low
epididymisMedium
fallopian tubeMedium
gallbladderLow
hippocampusMedium
kidneyMedium
lateral ventricleLow
liverMedium
lungMedium
lymph nodeLow
nasopharynxMedium
oral mucosaMedium
ovaryLow
pancreasHigh
parathyroid glandLow
placentaMedium
prostateMedium
rectumMedium
seminal vesicleMedium
skeletal muscleLow
skin 1High
small intestineMedium
spleenLow
stomach 1Low
stomach 2Medium
testisMedium
thyroid glandLow
tonsilLow
urinary bladderMedium
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*602274, gene) Udp-n-acetyl-alpha-d-galactosamine:polypeptide n-acetylgalactosaminyltransferaseOMIM


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