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> Protein (NX_Q10472)
Protein (NX_Q10472)
Protein
Gene SymbolGALNT1 to neXtProt (NX_Q10472)
DescriptionPolypeptide N-acetylgalactosaminyltransferase 1
Chromosome18
Location18q12.2 (33161081 ~ 33291798) to Ensembl
Sequene Features : Isoforms 2, Variants 55, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.cellular protein metabolic process
.post-translational protein modification
.protein O-linked glycosylation via threonine
  + 3 more...
.carbohydrate binding
.manganese ion binding
.polypeptide N-acetylgalactosaminyltransferase activity
.perinuclear region of cytoplasm
.Golgi cisterna membrane
.integral component of membrane
  + 3 more...
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 55 7
2014-09-19protein level
2 39 7
2014-05-27protein level
2 39 7
2014-02-25protein level
2 38 7
2013-12-09protein level
2 33 7
2013-11-01protein level
2 31 7
2013-09-12protein level
2 31 7
2013-08-17protein level
2 31 7
2013-07-15protein level
2 20 7
2013-06-11protein level
2 20 7
2013-02-12protein level
2 9 8
2012-12-20protein level
2 8 8
2012-10-30protein level
2 8 8
2012-10-07protein level
2 8 7
2012-08-24protein level
2 7 7
2012-07-28protein level
2 7 7
2012-06-08protein level
2 8 7
2012-05-07protein level
2 3 7
2012-04-10protein level
2 3 7
2012-01-13protein level
2 3 7
2011-12-20protein level
2 3 7
2011-11-11protein level
2 3 7
2011-08-23protein level
2 3 7
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q10472-1
20 3 3 64177.2308
NX_Q10472-2
0 3 0 12038.1302
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue77
adrenal gland151
ascites150
bladder200
blood65
bone195
bone marrow123
brain21
cervix82
connective tissue93
ear124
embryonic tissue56
esophagus99
eye57
heart134
intestine73
kidney61
liver97
lung77
lymph22
lymph node89
mammary gland46
mouth30
muscle37
nerve64
ovary39
pancreas42
parathyroid48
pharynx49
placenta60
prostate100
salivary gland49
skin61
stomach52
testis25
thymus25
thyroid193
trachea57
umbilical cord217
uterus86
vascular212
Health State
TissuesTPM*
normal55
adrenal tumor79
bladder carcinoma341
breast (mammary gland) tumor42
cervical tumor115
chondrosarcoma132
colorectal tumor44
esophageal tumor115
gastrointestinal tumor84
germ cell tumor60
head and neck tumor97
kidney tumor43
leukemia74
liver tumor166
lung tumor9
lymphoma55
non-neoplasia113
ovarian tumor52
pancreatic tumor76
primitive neuroectodermal tumor of the CNS7
prostate cancer154
retinoblastoma21
skin tumor15
soft tissue/muscle tissue tumor39
uterine tumor122
Developmental Stage
TissuesTPM*
adult65
embryoid body71
blastocyst32
neonate96
fetus77
infant42
juvenile143
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue29.9
adrenal gland23.9
appendix34.6
bone marrow18.9
cerebral cortex21.4
colon50.8
duodenum43.3
esophagus67.9
gallbladder36.4
heart muscle21.6
kidney16.4
liver25.3
lung23.8
lymph node33.8
ovary21.5
pancreas15.2
placenta48.6
prostate27
salivary gland39.5
skin45.9
small intestine53.8
spleen22.7
stomach30.8
testis22.6
thyroid gland29.8
urinary bladder97.7
Tissues
TissuesExpression level
adrenal glandHigh
appendixHigh
bone marrowMedium
breastHigh
bronchusHigh
cerebellumMedium
cerebral cortexMedium
cervix, uterineHigh
colonHigh
duodenumHigh
endometrium 1High
endometrium 2High
epididymisHigh
esophagusHigh
fallopian tubeMedium
gallbladderHigh
heart muscleMedium
hippocampusMedium
kidneyHigh
lateral ventricleMedium
liverMedium
lungHigh
lymph nodeMedium
nasopharynxHigh
ovaryMedium
pancreasMedium
parathyroid glandHigh
placentaHigh
prostateHigh
rectumHigh
salivary glandMedium
seminal vesicleMedium
skeletal muscleMedium
skin 1High
skin 2Medium
small intestineMedium
smooth muscleMedium
soft tissue 1High
soft tissue 2High
spleenHigh
stomach 1High
stomach 2High
testisHigh
thyroid glandHigh
tonsilMedium
urinary bladderHigh
vaginaHigh
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*602273, gene) Udp-n-acetyl-alpha-d-galactosamine:polypeptide n-acetylgalactosaminyltransferaseOMIM


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