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> Protein (NX_Q14677)
Protein (NX_Q14677)
Protein
Gene SymbolCLINT1 to neXtProt (NX_Q14677)
DescriptionClathrin interactor 1
Chromosome5
Location5q33.3 (157212751 ~ 157286183) to Ensembl
Sequene Features : Isoforms 3, Variants 62, PTMs 19 to neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.membrane organization
.clathrin coat assembly
.endocytosis
.post-Golgi vesicle-mediated transport
.clathrin binding
.lipid binding
.perinuclear region of cytoplasm
.intracellular membrane-bounded organelle
.clathrin-coated vesicle
  + 4 more...
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
3 62 19
2014-09-19protein level
3 50 19
2014-05-27protein level
3 50 19
2014-02-25protein level
3 50 19
2013-12-09protein level
3 35 19
2013-11-01protein level
3 35 17
2013-09-12protein level
3 35 19
2013-08-17protein level
3 35 19
2013-07-15protein level
3 25 11
2013-06-11protein level
3 25 11
2013-02-12protein level
3 7 39
2012-12-20protein level
3 7 39
2012-10-30protein level
3 14 39
2012-10-07protein level
3 14 13
2012-08-24protein level
3 11 13
2012-07-28protein level
3 11 13
2012-06-08protein level
3 18 13
2012-05-07protein level
3 18 13
2012-04-10protein level
2 18 13
2012-01-13protein level
2 11 13
2011-12-20protein level
2 11 13
2011-11-11protein level
2 11 12
2011-08-23protein level
2 11 12
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q14677-1
1 17 0 68215.604
NX_Q14677-2
1 17 0 68122.5608
NX_Q14677-3
0 18 0 70249.6879
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-1171113,EBI-373144 MAP1LC3B  
  .regulation of mitochondrion degradation
.membrane fusion
.nucleophagy
  + 3 more...
.microtubule binding .cytoplasmic vesicle
.organelle membrane
.extrinsic component of membrane
  + 9 more...
2 EBI-1171113,EBI-746969 GABARAPL1  
  .membrane fusion
.nucleophagy
.mitochondrion degradation
.autophagic vacuole assembly
.GABA receptor binding
.beta-tubulin binding
.Tat protein binding
.microtubule binding
.cell body
.dendrite cytoplasm
.dendrite membrane
  + 10 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue77
adrenal gland60
bladder301
blood32
bone83
bone marrow143
brain48
cervix82
connective tissue53
embryonic tissue84
esophagus49
eye47
heart44
intestine47
kidney80
larynx42
liver116
lung68
lymph22
mammary gland59
mouth75
muscle94
nerve64
ovary49
pancreas112
parathyroid48
pharynx171
placenta77
prostate73
salivary gland49
skin118
stomach52
testis64
thyroid128
tonsil58
trachea231
uterus38
vascular58
Health State
TissuesTPM*
normal63
adrenal tumor79
bladder carcinoma454
breast (mammary gland) tumor64
cervical tumor115
chondrosarcoma60
colorectal tumor26
esophageal tumor57
gastrointestinal tumor42
germ cell tumor49
glioma55
head and neck tumor141
kidney tumor43
leukemia105
liver tumor114
lung tumor29
lymphoma69
non-neoplasia51
ovarian tumor52
pancreatic tumor85
primitive neuroectodermal tumor of the CNS23
prostate cancer86
skin tumor135
soft tissue/muscle tissue tumor31
uterine tumor44
Developmental Stage
TissuesTPM*
adult88
embryoid body100
blastocyst81
neonate64
fetus39
juvenile53
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue31.8
adrenal gland37
appendix52.4
bone marrow106.6
cerebral cortex21.7
colon62.3
duodenum69.4
esophagus79.8
gallbladder77.1
heart muscle29.6
kidney62.6
liver54.5
lung40.2
lymph node61.1
ovary31.4
pancreas26.7
placenta47.6
prostate34.4
salivary gland43.5
skin54.6
small intestine61.2
spleen38.8
stomach81.8
testis27.9
thyroid gland67.6
urinary bladder59.4
Tissues
TissuesExpression level
adrenal glandHigh
appendixMedium
bone marrowLow
breastHigh
bronchusHigh
cerebellumHigh
cerebral cortexHigh
cervix, uterineMedium
colonHigh
duodenumHigh
endometrium 1High
endometrium 2High
epididymisHigh
esophagusHigh
fallopian tubeHigh
gallbladderHigh
heart muscleHigh
hippocampusMedium
kidneyHigh
lateral ventricleMedium
liverMedium
lungLow
lymph nodeHigh
nasopharynxHigh
pancreasHigh
parathyroid glandMedium
placentaHigh
prostateMedium
rectumHigh
salivary glandHigh
seminal vesicleHigh
skin 1Medium
skin 2Medium
small intestineHigh
soft tissue 1Low
soft tissue 2Medium
spleenHigh
stomach 1Medium
stomach 2Medium
testisHigh
thyroid glandMedium
tonsilHigh
urinary bladderHigh
vaginaMedium
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*607265, gene) Clathrin interactor 1; CLINT1OMIM


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