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> Protein (NX_Q15915)
Protein (NX_Q15915)
Protein
Gene SymbolZIC1 to neXtProt (NX_Q15915)
DescriptionZinc finger protein ZIC 1
Chromosome3
Location3q24 (147111209 ~ 147228080) to Ensembl
Sequene Features : Isoforms 1, Variants 135, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.positive regulation of transcription, DNA-templated
.inner ear morphogenesis
.positive regulation of protein import into nucleus
  + 7 more...
.metal ion binding
.sequence-specific DNA binding transcription factor activity
.DNA binding
.cytoplasm
.nucleoplasm
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
1 135 0
2014-09-19transcript level
1 105 0
2014-05-27transcript level
1 105 0
2014-02-25transcript level
1 104 0
2013-12-09transcript level
1 104 0
2013-11-01transcript level
1 103 0
2013-09-12transcript level
1 103 0
2013-08-17transcript level
1 103 0
2013-07-15transcript level
1 70 0
2013-06-11transcript level
1 70 0
2013-02-12transcript level
1 8 0
2012-12-20transcript level
1 8 0
2012-10-30transcript level
1 8 0
2012-10-07transcript level
1 8 0
2012-08-24transcript level
1 8 0
2012-07-28transcript level
1 8 0
2012-06-08transcript level
1 9 0
2012-05-07transcript level
1 3 0
2012-04-10transcript level
1 3 0
2012-01-13transcript level
1 2 0
2011-12-20transcript level
1 2 0
2011-11-11transcript level
1 2 0
2011-08-23transcript level
1 2 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q15915-1
10 0 5 48278.0457
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
brain19
ear186
embryonic tissue4
eye19
muscle9
testis2
Health State
TissuesTPM*
normal8
germ cell tumor15
glioma27
Developmental Stage
TissuesTPM*
adult4
embryoid body14
fetus7
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
cerebral cortex14.2
liver4.8
skin2.2
Tissues
TissuesExpression level
adrenal glandLow
bone marrowLow
breastLow
bronchusLow
cerebellumHigh
cerebral cortexHigh
duodenumLow
endometrium 1Low
endometrium 2Medium
epididymisMedium
esophagusLow
gallbladderLow
hippocampusHigh
kidneyHigh
lateral ventricleHigh
liverLow
lungMedium
lymph nodeLow
oral mucosaLow
pancreasLow
parathyroid glandMedium
placentaLow
prostateMedium
seminal vesicleMedium
skeletal muscleLow
skin 2Low
small intestineLow
stomach 1Low
stomach 2Low
testisMedium
tonsilLow
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*600470, gene) Zinc finger protein of cerebellum 1; ZIC1OMIM


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