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> Protein (NX_Q16385)
Protein (NX_Q16385)
Protein
Gene SymbolSSX2 to neXtProt (NX_Q16385)
DescriptionProtein SSX2
ChromosomeX
LocationXp11.22 (52725946 ~ 52736239) to Ensembl
Sequene Features : Isoforms 2, Variants 0, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.regulation of transcription, DNA-templated
.transcription, DNA-templated
.nucleic acid binding .nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 0 0
2014-09-19protein level
2 0 0
2014-05-27protein level
2 0 1
2014-02-25protein level
2 0 1
2013-12-09protein level
2 0 1
2013-11-01protein level
2 0 1
2013-09-12protein level
2 0 1
2013-08-17protein level
2 0 1
2013-07-15protein level
2 0 1
2013-06-11protein level
2 0 1
2013-02-12protein level
2 0 1
2012-12-20protein level
2 0 1
2012-10-30protein level
2 0 1
2012-10-07protein level
2 0 1
2012-08-24protein level
2 0 1
2012-07-28protein level
2 0 1
2012-06-08protein level
2 2 1
2012-05-07protein level
2 2 1
2012-04-10protein level
2 2 1
2012-01-13protein level
2 3 1
2011-12-20protein level
2 3 1
2011-11-11protein level
2 3 0
2011-08-23protein level
2 2 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q16385-1
0 5 4 21606.551
NX_Q16385-2
2 5 3 25157.1743
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-2210673,EBI-740037 ZBED1  
  .metabolic process .metal ion binding
.transposase activity
.DNA binding
.nuclear chromosome
2 EBI-2210673,EBI-10171697 KRT40  
  .N/A .structural molecule activity .intermediate filament
3 EBI-2210673,EBI-529518 TAX1BP1  
  .innate immune response
.negative regulation of apoptotic process
.negative regulation of type I interferon production
  + 2 more...
.metal ion binding
.kinase binding
.extracellular exosome
.cytosol
4 EBI-2210673,EBI-6872807 SYCE1  
  .cell division
.synaptonemal complex assembly
.N/A .central element
5 EBI-2210673,EBI-10182121 ZMIZ2  
  .positive regulation of transcription from RNA polymerase II promoter
.transcription, DNA-templated
.ligand-dependent nuclear receptor transcription coactivator activity
.zinc ion binding
.nuclear replication fork
.mitochondrion
.nucleoplasm
.nucleus
6 EBI-2210673,EBI-747844 RAB3IP  
  .positive regulation of GTPase activity
.cilium assembly
.protein localization to organelle
  + 3 more...
.Rab guanyl-nucleotide exchange factor activity .ciliary basal body
.lamellipodium
.cytoskeleton
  + 3 more...
7 EBI-2210673,EBI-9641546 AKAP9  
  .positive regulation of potassium ion transmembrane transporter activity
.regulation of heart rate by cardiac conduction
.cellular response to cAMP
  + 11 more...
.ion channel binding
.protein complex scaffold
.potassium channel regulator activity
.receptor binding
.intracellular membrane-bounded organelle
.ciliary basal body
.voltage-gated potassium channel complex
  + 5 more...
8 EBI-2210673,EBI-2548012 BLZF1  
  .Golgi to plasma membrane protein transport
.cell proliferation
.Golgi organization
  + 3 more...
.ubiquitin protein ligase binding
.enzyme binding
.sequence-specific DNA binding transcription factor activity
.DNA binding
.Golgi lumen
.cytoplasm
.nucleoplasm
  + 2 more...
9 EBI-2210673,EBI-5651487 MAGEC2  
  .positive regulation of ubiquitin-protein transferase activity
.cellular protein catabolic process
.ubiquitin protein ligase binding .cytoplasm
.nucleus
10 EBI-2210673,EBI-2212028 SSX2IP  
  .regulation of cell motility
.centrosome organization
.cilium assembly
  + 3 more...
.N/A .protein complex
.ciliary basal body
.centriolar satellite
  + 3 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
bone marrow20
liver9
placenta7
skin18
testis4
uterus4
Health State
TissuesTPM*
germ cell tumor7
leukemia10
liver tumor10
skin tumor127
uterine tumor22
Developmental Stage
TissuesTPM*
adult1
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
testis17.7
thyroid gland1.6
Tissues
TissuesExpression level
cervix, uterineLow
duodenumLow
fallopian tubeLow
gallbladderLow
heart muscleLow
kidneyLow
liverLow
nasopharynxLow
pancreasLow
salivary glandLow
small intestineMedium
stomach 1Low
stomach 2Low
testisHigh
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*300192, gene) Sarcoma, synovial, x breakpoint 2; SSX2OMIM
2synovial sarcomaCGP


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