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> Protein (NX_Q17RD7)
Protein (NX_Q17RD7)
Protein
Gene SymbolSYT16 to neXtProt (NX_Q17RD7)
DescriptionSynaptotagmin-16
Chromosome14
Location14q23.2 (62453803 ~ 62568431) to Ensembl
Sequene Features : Isoforms 4, Variants 143, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.synaptic vesicle exocytosis
.vesicle fusion
.clathrin binding
.syntaxin binding
.phospholipid binding
.calcium ion binding
.plasma membrane
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
4 143 0
2014-09-19transcript level
3 91 0
2014-05-27transcript level
3 91 0
2014-02-25transcript level
3 91 0
2013-12-09transcript level
3 64 0
2013-11-01transcript level
3 64 0
2013-09-12transcript level
3 64 0
2013-08-17transcript level
3 64 0
2013-07-15transcript level
3 43 0
2013-06-11transcript level
3 43 0
2013-02-12transcript level
3 16 0
2012-12-20transcript level
3 18 0
2012-10-30transcript level
3 26 0
2012-10-07transcript level
3 26 0
2012-08-24transcript level
3 24 0
2012-07-28transcript level
3 24 0
2012-06-08transcript level
3 27 0
2012-05-07transcript level
3 21 0
2012-04-10transcript level
3 21 0
2012-01-13transcript level
3 12 0
2011-12-20transcript level
3 12 0
2011-11-11transcript level
3 12 0
2011-08-23transcript level
3 12 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q17RD7-1
1 23 1 72228.8783
NX_Q17RD7-2
1 22 1 69994.9981
NX_Q17RD7-3
0 6 1 22809.3334
NX_Q17RD7-4
3 13 0 42773.9047
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-10238936,EBI-10176632 ZBTB14  
  .negative regulation of transcription, DNA-templated
.transcription from RNA polymerase II promoter
.negative regulation of transcription from RNA polymerase II promoter
.metal ion binding
.transcription regulatory region DNA binding
.sequence-specific DNA binding
  + 2 more...
.cytoplasm
.nucleoplasm
.nucleus
2 EBI-10238936,EBI-741181 AGTRAP  
  .regulation of blood pressure
.response to hypoxia
.angiotensin type II receptor activity .intracellular membrane-bounded organelle
.cytoplasmic vesicle membrane
.integral component of membrane
  + 6 more...
3 EBI-10238936,EBI-713786 PHC2  
  .cellular protein metabolic process
.post-translational protein modification
.protein sumoylation
  + 2 more...
.identical protein binding
.zinc ion binding
.DNA binding
.PRC1 complex
.PcG protein complex
.nucleoplasm
  + 2 more...
4 EBI-10238936,EBI-715945 RTN4  
  .regulation of branching morphogenesis of a nerve
.endoplasmic reticulum tubular network organization
.cardiac epithelial to mesenchymal transition
  + 11 more...
.poly(A) RNA binding .extracellular exosome
.neuronal cell body
.cell projection
  + 5 more...
5 EBI-10238936,EBI-712367 RABAC1  
  .N/A .identical protein binding .cell junction
.integral component of membrane
.membrane
  + 3 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
brain4
embryonic tissue4
placenta3
prostate5
testis4
vascular19
Health State
TissuesTPM*
normal1
Developmental Stage
TissuesTPM*
adult1
embryoid body14
fetus1
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
cerebral cortex4.7
prostate1.1
stomach1
testis2.1
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*610950, gene) Synaptotagmin 16; SYT16OMIM


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