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> Protein (NX_Q495C1)
Protein (NX_Q495C1)
Protein
Gene SymbolRNF212 to neXtProt (NX_Q495C1)
DescriptionProbable E3 SUMO-protein ligase RNF212
Chromosome4
Location4p16.3 (1050038 ~ 1107350) to Ensembl
Sequene Features : Isoforms 6, Variants 64, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.chiasma assembly
.protein sumoylation
.reciprocal meiotic recombination
.meiotic gene conversion
.ligase activity
.zinc ion binding
.synaptonemal complex
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
6 64 0
2014-09-19transcript level
6 57 0
2014-05-27transcript level
6 56 0
2014-02-25transcript level
6 55 0
2013-12-09transcript level
6 45 0
2013-11-01transcript level
6 43 0
2013-09-12transcript level
6 43 0
2013-08-17transcript level
6 43 0
2013-07-15transcript level
6 38 0
2013-06-11transcript level
6 38 0
2013-02-12transcript level
5 14 0
2012-12-20transcript level
5 14 0
2012-10-30transcript level
5 14 0
2012-10-07transcript level
5 14 0
2012-08-24transcript level
5 13 0
2012-07-28transcript level
5 13 0
2012-06-08transcript level
5 2 0
2012-05-07transcript level
5 2 0
2012-04-10transcript level
5 2 0
2012-01-13transcript level
5 2 0
2011-12-20transcript level
5 2 0
2011-11-11transcript level
5 2 0
2011-08-23transcript level
5 2 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q495C1-1
6 10 0 33342.7199
NX_Q495C1-2
1 4 0 14387.203
NX_Q495C1-3
0 10 0 21641.7604
NX_Q495C1-4
1 9 0 31116.3231
NX_Q495C1-5
1 10 0 26373.2207
NX_Q495C1-6
1 9 0 30336.9133
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
brain12
cervix41
connective tissue20
embryonic tissue4
eye14
intestine4
kidney14
liver4
lung11
ovary9
pancreas14
prostate10
skin4
testis29
thymus12
thyroid42
uterus12
Health State
TissuesTPM*
normal8
cervical tumor28
lung tumor19
non-neoplasia10
ovarian tumor13
prostate cancer9
skin tumor7
soft tissue/muscle tissue tumor23
uterine tumor22
Developmental Stage
TissuesTPM*
adult5
embryoid body14
fetus7
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue3.1
adrenal gland2.4
appendix2.5
cerebral cortex2.4
colon1.6
esophagus4.4
gallbladder3.9
kidney7.6
lung3.7
lymph node2.8
ovary14.5
pancreas9.7
prostate4
salivary gland3.1
skin2.4
spleen2
stomach2.3
testis11.1
thyroid gland9.4
urinary bladder1.6
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*612041, gene) Ring finger protein 212; RNF212OMIM
2(#612042, phenotype) Recombination rate quantitative trait locus 1; RRQTL1OMIM


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